KEGG   Sphingomonas sanxanigenens: NX02_11800
Entry
NX02_11800        CDS       T03929                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
ssan  Sphingomonas sanxanigenens
Pathway
ssan02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssan00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NX02_11800
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssan02044]
    NX02_11800
Secretion system [BR:ssan02044]
 Type IV secretion system
  Trb secretion system protein
   NX02_11800
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: AHE54066
UniProt: W0AAF6
Position
complement(2440149..2440838)
AA seq 229 aa
MSIFKRPSTHYGKSPEPETPYQKAAQAWDERIGSARVQAKNWRYMAFGSLILSAGFAAAL
VWQSARGTVVPWVVQVDNLGQAQTVAPANADYRPTDPQIAFHLGRFIEQVRAIPADAIIV
RQNWLRAYEWTTDRGAAALNDYARSNDPFTKVGRQQVAVEVSSVIRASNDSFRVAWTERH
YENGQLSTTERWTAILTIVIQTPRDSERLRANPLGIYVNAISWSREMSQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagcatcttcaaacgaccatcgacccattacggcaaatcgcccgaacccgagacgcct
taccagaaggctgctcaagcctgggatgagcgcatcggctcggcccgcgtgcaggcgaag
aactggcgctatatggccttcggatcgctgatcctctcggccggtttcgccgccgcgctc
gtctggcaatcagcgcgcgggaccgtggtgccgtgggtggtgcaggtcgataatctcggc
caggcgcagactgtcgcacccgctaacgccgattatcgcccgactgacccgcagatcgcg
ttccatctgggccgcttcatcgaacaggtccgggcgatcccggcagacgccatcatcgtc
cgccagaattggctccgcgcctatgagtggaccacggatcgcggcgcagcggccttgaac
gactacgcccgcagcaacgacccgttcacgaaggtcggtcggcagcaggtcgccgtcgag
gtttccagcgtcatccgagcatcgaacgacagcttccgcgtggcgtggaccgagcgccac
tatgagaacggccagctttccacgaccgaacgatggaccgcgatcctgaccatcgtgatc
cagaccccgcgtgactccgagcgcctgcgcgccaatccgctcggcatctatgtcaacgca
atctcatggtcgcgggagatgagccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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