KEGG   Sus scrofa (pig): 100049658
Entry
100049658         CDS       T01009                                 
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
  KO
K13091  RNA-binding protein 23/39
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100049658 (RBM39)
Spliceosome [BR:ssc03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    100049658 (RBM39)
SSDB
Motif
Pfam: RRM_1 RBM39linker RRM_occluded RRM_7 IHO1
Other DBs
NCBI-GeneID: 100049658
NCBI-ProteinID: XP_003360012
Ensembl: ENSSSCG00000007309
UniProt: A0A287BAQ0 A0A8D1B6K7
Position
17:complement(39032141..39064803)
AA seq 530 aa
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgagcgaaaaagaagcaaaagtaaggaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgatcaagaagtcgagatagaagattcagaggccgctacaggagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgctcccgaagcaaaagtccattcagaaaagacaagagccctgtcagggaa
cctattgataatctaactcctgaggaaagagatgcaaggactgttttctgcatgcagctg
gcagcaagaattcggccaagggatttggaagaatttttctccacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaattgcttatgtggag
tttgttgatgttagctcagtgcctctagcaataggattaactggccagcgggttttagga
gtgccaatcattgtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctttatgttggctcattacactttaac
ataactgaagatatgcttcggggaatctttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaactggtcgatccaaaggatacggatttattacattttctgat
tcagaatgtgccaagaaagctttggaacaacttaatggatttgagctcgcaggaaggcca
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcatttttggac
agtgacgaactggaaaggactggaattgacttgggaacaactggtcgtctccaattaatg
gcaagactggcagaaggtacaggtttgcagatcccaccagcagcacagcaggctttgcaa
atgagtggttctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagcattagctgcagctgcctctgttcaacct
cttgcaacacagtgtttccaactctctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagatcaaagatgatgtgattgaagaatgtaataagcatggaggagtt
attcatatttatgtcgataaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgctgcagccattgctgctgtcaatgcactgcatggcaggtggtttgctggtaaaatg
attacagcagcatatgtacctcttccaacttatcacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (23)   
   UniProt (2)   
   RefSeq(pep) (21)   
DNA sequence (29)   
   RefSeq(nuc) (21)   
   GenBank (4)   
   EMBL (4)   
Protein domain (5)   
   Pfam (5)   
All databases (80)   

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