KEGG   Sus scrofa (pig): 100154087
Entry
100154087         CDS       T01009                                 
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
  KO
K04495  transcription factor SOX17 (SOX group F)
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    100154087 (SOX17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100154087 (SOX17)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    100154087 (SOX17)
SSDB
Motif
Pfam: HMG_box Sox17_18_mid HMG_box_2 HTH_24
Other DBs
NCBI-GeneID: 100154087
NCBI-ProteinID: XP_001928411
Ensembl: ENSSSCG00000006256
UniProt: A0A8D0TDL0 F1RSI1
Position
4:complement(76854218..76857143)
AA seq 407 aa
MSSPDAGYASDEQSQPRSALPAVMAGLGPCPWAESLSPLGDMKMKGEAAATSGAPAGTAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPPATALGPDGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYNYAQAADYAGPPEPPAGPLHPRLGPEPAGPAMPGLLAPPSALHMYYGAM
GSPAAAGAGRGFQMPPQPPPPGPGQPSPPPEALPCRDSADPSQPAELLGEVDRTEFEQYL
HFVCKPDMGLPYQGHDSGVNLADSHGALSSVVSDASSAVYYCNYPDV
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgagcagcccggatgcggggtacgccagtgacgagcagagccagcctcggagcgcgctg
cccgccgtgatggccgggctgggcccctgtccctgggccgagtcgctgagtcccctcggg
gacatgaagatgaagggcgaggcggcggcgaccagcggggcaccggccgggaccgcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgccttcatggtgtgggctaag
gacgagcgcaagcgcctggcgcagcagaacccggacctgcacaacgccgagctgagcaag
atgctgggcaagtcttggaaggcgctgacgctggcggagaagcggccgttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
cgacgcaagcaggtgaagcggctgaagcgggtggagggcggcttcctgcacggcctcgcg
gagccccccgcgaccgcgctgggccccgacggcggccgcgtggccatggacggcctgggc
ctgcccttccccgagcagggcttccccgcgggcccgccgctgctgcccccgcatatgggc
ggccactaccgcgactgccagggcctgggcgcgcccccgctcgacggctacccgctgccc
actcccgacacgtccccgctcgacggcgtggagcctgatccggccttcttcgccgcgccg
ctacccggggactgtccggccgccgggccctacaactacgcacaggccgcggactacgca
gggcccccggagccgcccgccgggcccctgcacccccggctcggcccggagcccgcgggc
cccgcgatgccgggcctcctggcgccccccagcgccctgcacatgtactacggcgcgatg
ggctcgccagcggcggcaggcgccgggcgcggcttccagatgccgccgcagccgcccccg
ccgggccccgggcaaccgtcgcccccgcccgaggcgctgccctgccgggacagcgcggac
ccgagccagccggccgagcttctcggggaggtggaccgcacggagtttgaacaatatctg
cactttgtgtgcaagcccgacatggggctcccctaccagggccatgactcgggcgtgaac
ctcgcggacagccacggggccctctcgtcggtggtgtccgatgccagctccgcagtgtat
tactgtaactaccccgacgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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