KEGG   Sus scrofa (pig): 100156029
Entry
100156029         CDS       T01009                                 
Symbol
GPC4
Name
(RefSeq) glypican-4
  KO
K08110  glypican 4
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    100156029 (GPC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ssc00535]
    100156029 (GPC4)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ssc00537]
    100156029 (GPC4)
Proteoglycans [BR:ssc00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   100156029 (GPC4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ssc00537]
 Others
  100156029 (GPC4)
SSDB
Motif
Pfam: Glypican Corona_6B_7B DUF5082
Other DBs
NCBI-GeneID: 100156029
NCBI-ProteinID: XP_001925506
Ensembl: ENSSSCG00000012679
Vega: OTTSUSG00000004880
UniProt: A0A4X1WA83 F1RTE1
Position
X:complement(109306489..109421947)
AA seq 556 aa
MARFGLPALLCTLAALSAALLAAEPKSKSCSEVRRLYVSKGFDKNDAPTHEINGDHLKIC
PQGYTCCSQEMEEKYSLQSKDDFKSVVSEQCNHLQAVFASRYKKFDEFFKELLENAEKSL
NDMFVKTYGHLYMQNSELFKDLFEELKRYYVAGNVNLEEMLQDFWARLLERMFRLVNSQY
HFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVVSKVSVVNP
TAQCTHALLKMIYCSHCQGLVTVKPCYNYCSNIMRGCLANQGDLDFEWNNFIDAMLMVAE
RLEGPFNIESVMDPIDVKISDAIMNMQENSVQVSQKVFQGCGPPKPLPAGRLSRSISEGA
FSARFRPFHPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSNVCNDERMAAGNGNE
DDCWNGKGKSRYLFAVTGNGLANQGNNPEVQVDTSKPDILILRQIMALRVMTSKMKNAYN
GNDVDFFDISDESSGEGSGSGCEYQQCPSEFEYNATEHSGKNAHDKASSAGAPARAQPYL
LTAFGILSLVMPREWR
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcacggttcggcttgcccgcgctgctctgcaccctggccgcgctcagcgccgcgctg
ctggctgccgagcccaagtcgaaaagttgctcggaagtgagacgtctctacgtgtccaaa
ggcttcgacaagaacgatgcccccacgcacgagatcaacggggatcatttgaagatctgt
ccccagggttacacctgctgctctcaagagatggaggagaaatacagcctgcaaagtaag
gatgatttcaaaagtgtggtcagcgaacagtgcaaccatttgcaagccgtctttgcttcc
cgttacaagaagtttgatgaattctttaaagaactgcttgaaaatgcggagaagtccctg
aatgacatgttcgtgaagacctacggccacttatacatgcaaaactccgagctgttcaag
gatctcttcgaggagttgaagcgctactacgtggcgggcaacgtcaacctggaggagatg
ctccaggacttctgggcccgcctcctggagcgcatgttccgcctggtgaactcccagtac
cacttcaccgacgagtatctggaatgcgtgagcaagtacacggagcagctgaagcccttt
ggagatgtccctcgaaaactgaagctccaggtcactcgtgcgtttgtagcagcccggacc
tttgctcagggcttagccgtcgcaagagatgtagtgagcaaagtctccgtggtcaatccc
acagcccagtgtacccacgccctgctgaagatgatctactgctcccattgccaaggtctc
gtgaccgtgaaaccgtgttacaactactgctccaacatcatgagaggctgtctggccaac
caaggggatctggatttcgagtggaacaatttcatagatgctatgctgatggtggccgag
aggctggagggtcctttcaacattgagtctgtcatggatcccatcgacgtgaagatttct
gatgccatcatgaacatgcaggagaacagcgtacaggtgtctcaaaaggtgttccagggc
tgtggcccccccaaacccctgccggctggccgcctctcccgctccatctccgaaggtgcc
ttcagcgcccgcttcaggccatttcaccccgaggagcgcccgaccacggcagccggcacc
agtttggaccgactggttactgatgtcaaggagaagctgaaacaggccaagaagttctgg
tcctctcttcccagcaacgtctgcaatgacgagaggatggctgcaggcaatggcaatgag
gacgactgctggaatggaaaaggcaaaagcaggtacctgtttgcagtgacaggaaatgga
ttagccaaccagggcaacaatccagaggtccaggtcgacaccagcaaaccagacatactg
atccttcgtcaaatcatggctcttcgagttatgaccagcaaaatgaagaatgcttacaat
gggaacgacgtggacttctttgatatcagtgatgaaagcagtggagaaggaagtgggagt
ggctgtgagtatcagcagtgcccttcggagtttgagtataatgcaactgagcactctggg
aagaatgcccatgataaagccagcagcgctggggcccctgccagggcccagccctacctc
ctcactgcctttggcatcttgtccctggtcatgccgagagagtggagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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