KEGG   Sus scrofa (pig): 100156879
Entry
100156879         CDS       T01009                                 
Name
(RefSeq) cytochrome b-c1 complex subunit 1, mitochondrial isoform X4
  KO
K00414  ubiquinol-cytochrome c reductase core subunit 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc00190  Oxidative phosphorylation
ssc01100  Metabolic pathways
ssc04260  Cardiac muscle contraction
ssc04714  Thermogenesis
ssc04932  Non-alcoholic fatty liver disease
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05208  Chemical carcinogenesis - reactive oxygen species
ssc05415  Diabetic cardiomyopathy
Module
ssc_M00152  Cytochrome bc1 complex
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    100156879
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    100156879
  09159 Environmental adaptation
   04714 Thermogenesis
    100156879
 09160 Human Diseases
  09161 Cancer: overview
   05208 Chemical carcinogenesis - reactive oxygen species
    100156879
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100156879
   05012 Parkinson disease
    100156879
   05014 Amyotrophic lateral sclerosis
    100156879
   05016 Huntington disease
    100156879
   05020 Prion disease
    100156879
   05022 Pathways of neurodegeneration - multiple diseases
    100156879
  09166 Cardiovascular disease
   05415 Diabetic cardiomyopathy
    100156879
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    100156879
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    100156879
Peptidases and inhibitors [BR:ssc01002]
 Metallo peptidases
  Family M16: pitrilysin family
   100156879
SSDB
Motif
Pfam: Peptidase_M16 Peptidase_M16_C M16C_assoc Vps39_1
Other DBs
NCBI-GeneID: 100156879
NCBI-ProteinID: XP_001926664
Ensembl: ENSSSCG00000011356
UniProt: A0A8D0PK14 F1SKM0
Structure
Position
13:complement(31298449..31308719)
AA seq 480 aa
MAASAVCRVAGTGSRVLLRTCRSPALLRSPALRGTATYAQALQSVPETQVSQLDNGLRVA
SEQSSQPTCTVGVWIDAGSRYENEKNNGAGYFVEHLAFKGTKNRPGSALEKEVESMGAHL
NAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDSSMR
DVVFDYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYVSQHYKAPRMVLAAAGGVEHR
QLLDLAQKHFSSLSGTYVEDAVPAFTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPD
NVPLQVANAIIGHYDSTYGGGTHMSSTLASVAATRKLCQSFQTFNICYAETGLLGAHFVC
DNMSIDDMMFFLQGQWMRLCTSATESEVVRGKNILRNALVSHLDGTTPVCEDIGRSLLTY
GRRIPLAEWESRIAEVDASVVREVCSKYFYDQCPAVAGLGPIEQLPDYNRIRSGMFWLRF
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcggcttccgcggtctgccgggtggccggcaccggcagtcgagtgctgctgcgcacc
tgccgctcgccggccttgctgaggtctcctgcgttgcggggcaccgccacctatgcccaa
gctctccagagcgtgccagagacgcaggtcagccagctggacaacgggctgagagtggcc
tcggagcagtcctcccagcctacctgcacggtgggtgtgtggattgacgcgggcagccgt
tacgagaatgagaagaataatggggcaggctactttgtggagcatctggctttcaaggga
acaaagaatcggcctggcagtgccttggagaaggaggtggagagcatgggggcccatctt
aatgcctacagcacccgggagcacacggcttactacatcaaagcgctatccaaggacctg
ccaaaagctgtggaactcctggccgacattgtgcagaactgcagcctagaagactcccag
attgagaaggagcgtgatgtgatcctacaggagctgcaggagaatgactcgtctatgcgg
gacgtggtctttgactacctgcatgccacggcatttcagggcacgcctttagctcagtcc
gtggaggggcccagtgagaatgtcaggaagctgtctcgggcagacttgacagagtatgtc
agccagcattacaaggcccctcgaatggtgcttgcagcagctggaggggtggagcaccgg
cagctgctggacctcgcccagaagcacttcagcagcctctctgggacatacgttgaggac
gctgtgcctgcttttactccgtgccgcttcaccggcagtgagatccgccaccgtgacgat
gccctccctttggcccatgtggccattgcagtggaggggcccggctgggccaacccggac
aatgtgcccctccaggtggccaatgccatcatcggccactatgactccacttacggtggt
ggcacacacatgtcgagcacactggcctcagttgctgctaccagaaagctgtgccagagt
ttccagactttcaacatctgctacgcagagactggtttgcttggcgctcactttgtctgt
gacaacatgagcattgatgacatgatgttcttcctgcagggccagtggatgcgcctgtgc
accagtgccacagagagtgaggtggtccggggcaaaaacatcctcagaaatgccctggtg
tctcatctggatggcaccactcctgtgtgtgaggacattggacgcagtctcctgacctat
gggcgccgcatccccctagctgagtgggaaagccggattgcggaggtggatgccagtgtg
gtgcgtgaggtctgctccaagtacttctatgaccagtgtccagcagtggctggactgggc
cccattgagcagcttccagattataaccggatccgcagcggcatgttctggctgcgcttc
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (13)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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