KEGG   Sus scrofa (pig): 100157362
Entry
100157362         CDS       T01009                                 
Symbol
PCDH17
Name
(RefSeq) protocadherin-17 isoform X3
  KO
K16499  protocadherin delta 2
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    100157362 (PCDH17)
Cell adhesion molecules [BR:ssc04515]
 Cadherins
  Protocadherins
   100157362 (PCDH17)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 NUC153 PepSY
Other DBs
NCBI-GeneID: 100157362
NCBI-ProteinID: XP_001927302
Ensembl: ENSSSCG00000009446
Position
11:30510779..30611732
AA seq 1161 aa
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGGAGGR
SKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMI
KVEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGL
FALDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSND
NSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDP
KTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQ
GALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGAGGGGGLGGPGGSVPFKLEENY
DNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYV
LQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALR
SFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVP
RNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPV
VELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISII
LLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERN
AMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTG
QGTNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQA
DSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQF
PATNQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPY
LKAKRALSPLLQEVPSASSSPTKACIEPCTSMKGSLDGCEAKPGALAEASSQYLPTDSQY
LSPSKQQRDPPFLASEQMARVFADVHSRASRDSSEMGAVLEQLDHPSRDLGRESVDAEEV
VREIDKLLQDCRGNDPVAVRK
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgtacctttccatctgttgctgtttcctcctatgggcccccgccctgacgctcaaaaac
ctgaactattcggtgccggaggagcaaggggccggcacggtgatcggcaacatcggcaag
gatgctcgactgcagccggggcttcctcccgcagagcgcggcggcggtgcaggtgggcga
agcaagtccggtagctaccgggtgctagagaactcggcgccgcacctgctggacgtggac
gccgacagcgggcttctctacaccaagcaacgcatcgaccgcgagtctctctgccgccac
aacgccaagtgccagctatccctcgaggtgtttgccaacgacaaagagatctgcatgatc
aaggtagagatccaggacatcaacgacaatgctccctccttcccctcagaccagattgag
atggacatttcagagaacgcggcccccggcacccgcttccccctcaccagtgcacatgac
cccgacgctggcgagaacgggctccgtacctatctgcttacgcgagacgaccacggcctc
ttcgcgctggacgtcaagtcccgcggcgacggcaccaagttcccagagctggttatccag
aaagcattggaccgcgagcagcagaaccaccacacgctcgtgctgactgccctggatggc
ggcgaaccgccgcgctcagccaccgtgcaaatcaacgtgaaggtgatagactctaacgac
aacagcccggtcttcgaggcaccctcctacctggttgaactgcccgagaacgccccgctg
ggcaccgtggtcattgatctgaatgccaccgacgccgacgaaggtcccaatggcgaagtg
ctctactccttcagcagctatgtgcccgaccgcgtgcgggagctcttctccatcgacccc
aagactggcctgatacgtgtcaagggaaacctggactatgaggagaatggaatgctggag
atcgacgtgcaggcccgagacctaggtcccaaccccatcccggcccactgcaaggttact
gtcaagctcatcgaccgcaacgacaacgcgccgtccattggtttcgtctccgtgcgccag
ggggcgctgagcgaggccgccccgcccggtaccgtcatcgccctagtgagggtcaccgac
cgagactcgggcaagaacgggcagctgcagtgcagggtcctgggcggaggtggggcgggc
ggcggcggcggcctgggaggaccgggagggtccgtgcccttcaagcttgaggagaactac
gacaacttctacacggtggtgacggaccgcccgctggaccgcgagacacaggacgagtac
aacgtgacaatcgtggcgcgggacgggggatcgcctccactcaactccaccaagtccttt
gccgtcaagattctggacgagaatgacaacccgcctcgtttcaccaagggactctatgtg
ctgcaggttcatgagaacaacatccctggagagtacttgggctctgtgctcgcccaggac
cccgacctgggccaaaatggcacggtgtcctattcaatcttgccctcacacatcggcgac
gtgtccatctacacgtatgtgtctgtgaaccccacaaacggggccatctacgccctgcgc
tcctttaactacgaacagaccaaggctttcgagttcaaggtgcttgctaaggactctggg
gcgcccgcacacttggagagcaacgccactgtgagggtgacagtactggacgtgaatgac
aacgctccggtgatcgtgctgcctacgctgcagaacgacaccgctgagctgcaggtgcca
cgcaacgcagggctgggctacctggtaagcactgtacgcgcacttgacagcgactttggc
gagagcgggcgcctcacatatgagatcgtagacggtaatgacgaccacctgtttgaaatc
gatccatccagcggcgagattcgcacgctgcaccctttctgggaggacgtgacaccggtg
gtagagctggtagtgaaggtgacggaccacggcaagcccaccctgtctgcggtggccaag
ctcatcatccgctcggtgagcggctccttgcccgagggggtcccccgggtgaatggcgaa
cagcaccactgggacatgtctctgccgcttatcgtgactctgagcactatctccatcatc
ctcctagcggccatgatcaccatcgccgtcaagtgcaagcgcgagaacaaggagatccgc
acttacaactgccgcatcgccgagtacagccacccgcagctgggcgggggaaagggcaag
aagaagaagatcaacaaaaatgatatcatgctggtgcagagcgaggtggaggagaggaac
gccatgaacgtcatgaacgtggtgagcagcccctccctggctacctcccccatgtacttc
gactaccagacccgcctgcccctgagctcacctcggtcggaggtgatgtatctcaaaccg
gcctccaacaacctgactgtccctcagggtcatgctggctgccacaccagcttcaccgga
caagggactaatgcgagcgagaccccagccactcggatgtccataattcagacagacaat
tttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacg
tttaaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggct
gacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactc
aagatgaaaactacttcaactaaaagccaaccacttgaacaagaacctgaagagtgtgtt
aattgcacagatgaatgccgagtgcttggtcattctgacaggtgttggatgccacagttc
cctgcaaccaatcaggctgaaaatgcagattaccgcacaaatctctttgtacccacagtt
gaagctaacgttgagactgagacttacgaaactgtgaatcccactgggaaaaagactttt
tgtacatttggaaaagacaagcgagagcacacgattctcattgccaatgtgaaaccttat
ttaaaagccaaacgtgccctgagccctctcctccaagaggtcccctcagcatcaagcagc
ccaaccaaggcatgcattgagccttgcacctcaatgaaaggctccctggatggttgtgaa
gcaaaaccaggagccctggccgaggcaagcagccagtacttgcccactgacagtcagtac
ctgtcccccagcaagcagcagagagaccctcccttcctggcttctgagcagatggcaagg
gtctttgcagatgtgcattcaagagccagccgggattccagtgagatgggcgctgtcctg
gagcagcttgaccaccccagcagggatctgggcagagagtcggtggatgcagaggaagtc
gtgagagaaattgataagcttctgcaggactgccggggaaatgaccctgtggctgtgaga
aagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (16)   
   RefSeq(nuc) (4)   
   GenBank (6)   
   EMBL (6)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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