KEGG   Sus scrofa (pig): 100157771
Entry
100157771         CDS       T01009                                 
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X6
  KO
K20493  leucine-rich repeat-containing protein 16
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100157771 (CARMIL1)
Membrane trafficking [BR:ssc04131]
 Others
  Actin-binding proteins
   Nucleation-promoting factors (NPFs)
    100157771 (CARMIL1)
SSDB
Motif
Pfam: CARMIL_C Carm_PH LRR_6 Cep57_CLD IL34
Other DBs
NCBI-GeneID: 100157771
NCBI-ProteinID: XP_001924399
Ensembl: ENSSSCG00000001100
UniProt: A0A480IRX4
Position
7:20036430..20353431
AA seq 1370 aa
MTEESSEVPGELIESIKDVIGRKIKIALKKKVKLEVKGDKVENKVLVLTSCRAFLVTARI
PTKLEITFSYLEIHGVICSKPAQMVVEMEKCSISMKMASPEDVSEVLAHVGTCLRRIFPG
LSPVRIMKKVCMEPSERLASLQALWDSQPVAEQGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLAGNPLEDRGVSALSIQF
AKLPKGLKHLNLSKTSVSPKGVNSLFQSLSANPLTATTLIHLDLSGNILRGDDLSSMYSF
LAQPNAIAHLDLSNTECSLDMVCGALLRGCLQYLAVLNLSRTVFSHRKGKEVPPSFKQFF
SSSLALMQINLSGTKLSPEPLKALLLGLACNHNLKGVSLDLSSCELRSGGAQVLEGCIAE
IHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGGDAVQEDLKSA
ERLMRDAKNSKTLLPNLYHVGGESWAGASGLLSSPIQETLESMAGEVTRVVDEQLKALLE
SMVDAAENLCPNVMKKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRIVDEILDALSHCHHKLADHFSKRGKTLPQQDSVELELAEEKPVKRSLITVEE
LTEIERLEDLDTCMMTPKSKRKTIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPLPS
IRQEKRSSGFISDLPSEEGKKLEHFTKLRPRRAKKQQSTHAAGCPTSIVSQDGEQNGLMG
RVDEGVDEFFTKKVTKMDSKRWSARGSESHELSEGGDEKKKRDFRKSGFLNLIKPRSKCD
RSPAVLATEELSSPKAGVRSPAVDAPRKDTKAAEHNGSAERAEELKTPESLEEGQGEEVG
KVERSDSKGSPQGGRRYGVQMMGSGLLAEMKAKQERRAAGSQKKLGSEATPQDPSSLALG
SSEQLDGGGAVPKVHPENRFALGTPEKNAKVELRAEGGSRSRSFSSRPTSPKPLLQSPKP
SPGARPTIPQKPRTASRPEDLPHSPSSPGSPKVALLPPVLKKVPSDKERDGQSSPQPSPR
TFSREVARRSWGQQAQECQEQKQWSSGKDGQQGSKSSDSGEEAEKEFIFV
NT seq 4113 nt   +upstreamnt  +downstreamnt
atgaccgaggagagctccgaggtgcccggggagttgatagaaagcataaaggatgttatt
ggcagaaagataaagattgcattgaagaagaaagtaaagttggaagttaagggagacaaa
gttgaaaacaaagtgctggtgctcacgtcatgccgagccttcctcgtgacagcgcggatc
cccaccaagctcgaaataaccttcagctacttggagattcatggcgtcatctgcagtaag
ccagctcagatggttgtggaaatggagaaatgcagcatctccatgaagatggcatcgccc
gaggacgtgagtgaggtgctggcacacgtgggcacctgcctgcgcaggatcttccctggc
ctctcgcccgtgagaatcatgaaaaaagtctgcatggagccatctgagcggctggccagt
ctccaggctctgtgggatagccagcctgtggccgagcagggcccctgtggtggattttct
cagatgtatgcctgtgtctgcgactggcttggattttcttacagggaagaagtacaatgg
gacgtggatacaatttacctgacacaagacaccagggaattgaatttacaagacttcagt
catcttgaccacagggacctaataccgatcattgctgctctggaatacaatcagtggttc
actaagctgtcctctaaggatctcaaactgtccaccgatgtctgtgaacagatcttgagg
gtggtgagtaggtccaatcgactggaagaattggtattggaaaacgctggacttagaaca
gattttgcacaaaaactggccagtgctctagcacataatcccaactcaggactccacacg
attaaccttgctggcaatccactggaggatcgaggtgtgtcggctttaagtattcagttt
gccaaactcccaaaaggattaaagcatttaaatttatctaaaacctcagtgtcacctaaa
ggggtgaatagcctttttcagtcactcagtgccaaccccttgaccgccaccacccttatc
catctggacctctcagggaacatccttcgcggagatgacctctcgtccatgtacagtttt
ttggctcagccaaatgccattgctcatctggatttatccaatacagaatgttccctggac
atggtctgtggagctcttcttcgtggctgccttcaatatttagctgtgctcaatctctcc
agaacagtcttttctcatcggaaaggaaaagaagtccccccatctttcaagcagtttttc
agcagttctctggctctgatgcaaatcaacctttcaggcacaaaactgtctcctgagccc
ttaaaggcgctattgctgggcctggcctgtaatcacaacctgaagggggtttctcttgat
ctcagcagctgtgagctgaggtctggaggtgcacaggtattagaaggctgcatcgccgaa
atccacaacatcaccagcttagacatctctgacaatggtttagaatctgacctatctacc
ttaatagtgtggctcagtaaaaacagatcaatacagcacctggcgttaggcaaaaatttt
aataatatgaaatccaaaaatctgacgcctgtgttggacaacttagtacagatgattcaa
gatgaagaatcacctctgcagtccttgtccctggccgactcgaaactcaagaccgaggtc
accatcatcatcaatgccctgggaagcaacacctccctgaccaaagtggacatcagtggg
aacggcatgggggacatgggggcgaagatgctggccaaagcgctgcagatcaacaccaag
ctcaggacagttatatgggacaaaaacaacatcacggcacaaggctttcaagatatagct
gttgctatggaaaagaactacaccttgagatttatgccaattcccatgtacgatgcttct
caagccttaaaaacaaatcctgaaaaaacagaagaggctctgcagaagatagaaaactac
ctgctccggaatcacgagactagaaaataccttcaagagcaggcctaccgcctacagcag
ggcattgtcaccagcaccacacagcagatgattgacagaatatgtgtgaaagttcaagat
catctcaactccttacgaaactgtggcggagatgccgtccaggaagatttaaaatcagca
gaaaggctcatgcgtgatgctaagaactctaaaacgctgttaccaaatttataccacgtt
ggtggtgagtcttgggcgggagccagtggcttgttatccagtccaattcaggaaaccctg
gaatcaatggccggagaagttacgagagttgtcgatgaacaactcaaggcgctgcttgag
tccatggttgatgctgccgagaatctgtgtcccaacgtgatgaaaaaagcccacattcga
caagacttgattcatgccagcactgaaaagatttccatcccacgtacctttgttaaaaat
gtcctgttggagcagtctggaattgatatccttaacaaaattagtgaagtgaagttgaca
gtggcctccttcctctctgatcgaattgtggacgaaattctggatgcactttcacactgc
catcataaactggctgaccatttcagcaaacgtggcaagacccttcctcaacaagattct
gtagagctcgagctggctgaggagaagccagttaaacgctccctcatcacagtggaggag
ctcacagagattgagcgtttggaagatctggatacttgtatgatgactcctaaatccaaa
aggaagactatccatagccgaatgctgcggccggtttccagggcctttgaaatggagttt
gaccttgataaagccctggaagaagtgccaattcacatcgaagaccctcctttgccatcc
atcagacaagagaaacggagctcagggtttatctcggacttgccctccgaggaaggaaag
aagctggagcactttaccaagttaagaccaagacgggctaagaagcagcaatccacccat
gcagcgggctgtcctaccagcatagtctcccaagatggtgaacagaacggtctgatgggc
agagtcgatgaaggtgtagatgaatttttcaccaagaaggtgaccaaaatggattccaag
agatggtcggcaagaggctcagagtcccacgagcttagcgaaggaggagacgagaagaaa
aagcgggactttcggaaaagcggctttctcaatttaatcaaaccccggtccaaatgtgac
cggtccccagcagtcttggcgaccgaagaactctcctcccccaaggcgggagtccgaagt
ccagccgtggacgcccccaggaaggacacgaaggctgccgagcacaatggcagtgctgag
cgggcggaggaactcaaaacacctgagtccctagaggaaggtcaaggggaggaggtgggg
aaggtggagcgcagtgacagcaagggcagcccacagggaggacggaggtacggggtccag
atgatgggcagcggtctgctggcagagatgaaggccaagcaggagcggagggctgctggc
tcgcagaagaaacttgggagtgaagccaccccccaggatccttccagcctggccttgggc
agctcggaacagttggatggaggtggggcagtgcccaaagtgcacccagagaaccgcttc
gctttgggaacaccagaaaagaatgccaaagtggagctcagagcggaggggggctccagg
tctcggagcttttccagcaggcccaccagcccgaagccgctcctgcagtcccccaaaccc
agcccaggggcgagacccaccatcccgcagaaaccacgcactgcctcgcggccagaggac
ctcccacactctccatccagcccgggttcgcctaaagtcgctcttcttccgcctgtgctg
aaaaaagttccttcggacaaggagagagatggccagagtagcccgcagcccagtcccagg
acattttcccgggaagtggcgaggagaagctggggccagcaggcccaggagtgtcaagaa
caaaagcaatggtcctccggaaaagatggccagcaaggcagcaaatccagtgactctgga
gaagaagcagaaaaagagtttatttttgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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