KEGG   Sus scrofa (pig): 100158121
Entry
100158121         CDS       T01009                                 
Name
(RefSeq) histone H2A type 1
  KO
K11251  histone H2A
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03082  ATP-dependent chromatin remodeling
ssc04217  Necroptosis
ssc04613  Neutrophil extracellular trap formation
ssc05034  Alcoholism
ssc05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100158121
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100158121
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100158121
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    100158121
  09165 Substance dependence
   05034 Alcoholism
    100158121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100158121
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100158121
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    100158121
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100158121
SSDB
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF Ribosomal_L27A
Other DBs
NCBI-GeneID: 100158121
NCBI-ProteinID: XP_001927727
Ensembl: ENSSSCG00000023149
Vega: OTTSUSG00000003592
UniProt: F2Z587 A0A8D1QBH6
Position
7:complement(20857026..20858357)
AA seq 130 aa
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
TESHHKAKGK
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtcgggccgcggaaaacaaggtggcaaggctcgtgccaaagccaagactcggtcttcg
cgggccggcctccaattccccgtcggccgagtgcaccgtttgctccgaaaaggcaactac
gccgagcgagtcggtgccggcgcaccagtgtacttggcggcggtgctggagtacctgacg
gctgagatcctggagctggcaggcaacgcggctcgcgacaacaagaagacccgcattatc
ccgcgccacctgcagctggccatccgcaacgatgaggagctcaataaactgctgggcaaa
gttaccatcgcgcagggcggcgtcctgcccaacatccaggctgtgctcttgcccaaaaag
acggagagccaccacaaggccaagggcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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