KEGG   Sus scrofa (pig): 100270813
Entry
100270813         CDS       T01009                                 
Symbol
VARS
Name
(RefSeq) valine--tRNA ligase
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100270813 (VARS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ssc01007]
    100270813 (VARS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ssc03016]
    100270813 (VARS)
Enzymes [BR:ssc01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     100270813 (VARS)
Amino acid related enzymes [BR:ssc01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   100270813 (VARS)
Transfer RNA biogenesis [BR:ssc03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100270813 (VARS)
 Prokaryotic type
    100270813 (VARS)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 GST_C tRNA-synt_1g tRNA-synt_1_2 Jag_N GST_C_2 tRNA-synt_1e
Other DBs
NCBI-GeneID: 100270813
NCBI-ProteinID: NP_001182307
UniProt: A0A8D1SAD4 B9TSR5
Position
7:complement(23886132..23899265)
AA seq 1265 aa
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRVCLQPPPASRTPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALG
LRSSAQDPQAALGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPSA
RRIWGNVTRWFITCVQQPEFRAVLGEVVLFSGTRPASQQPGPEVSAPTKTAAQLKKEAKK
REKLEKFQQKQKIQQQQPPPGEQKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDS
YSPQYVEAAWYPWWERQGFFKPEYGRSSVSAPNPRGTFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLREVWKW
KEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVIEAFVRLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIE
TMLGDVAIAVHPEDPRYQHLKGKSVVHPFVSRSLPVIFDDFVDMEFGTGAVKITPAHDQN
DYEVGQRHGLEAVSIMDARGALVNVPPPFLGLPRFEARKAVLAALKERGLFRGVEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDW
CISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRTEAEAREKAAKEFGVSPDKIS
LQQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLK
LTGKLPFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHNQLVNSNLDPSEM
EKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKGFVPSATSEPGGRESLADRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWL
YELCDVYLECLKPVLNGVDQVAAESARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRT
PQAPPSLCVTSYPEPSECSWKDPEAEAAFELALSITRAVRSLRADYNLTRIRPDCFLEVA
DEATGALASAVSGYVQTLASAGIVAVLALGASAPQGCAVALASDRCSVHLQLQGLVDPAR
ELGKLQAKRDEAQRQAQRLQERRAASSYSVKVPLKVQEADEAKLQQTEAELRKVEEAIAL
FQKML
NT seq 3798 nt   +upstreamnt  +downstreamnt
atgtccatcctctacgtctctcctcaccccgatgccttccccagcctccgagccctcata
gctgcccgctacggcgaggctggggagggtccaggatggggaggagcccacccccgcgtc
tgtcttcagccgcccccggccagcaggactccctttcccccaccccgcctgcccgccctg
gagcaggggcccggtgggctctgggtgtggggagccacggccgtggcccagctgctgtgg
ccagcaggcctggggggccctggaggtagtcgggccgctgtccttgtccagcagtgggtc
agttatgcagacacggagctaataccagctgcctgtggggcaacgctgccagctttggga
ctccgaagctctgcccaggacccccaggctgcgctgggggccctgggcagggccctgagc
cccttggaagaatggcttcggttgcacacctacctggctggggaggccccgactctggct
gacctggcagctgtcacagccttgctgctgccattccgttacgtcctggatccctctgcc
cggcggatctggggcaatgtgacccgctggtttatcacctgtgtccagcagccagaattc
cgggccgtgctaggagaggtggttctgttctcagggaccaggcctgcctcccaacagcca
ggccccgaggtctctgcacccacaaagacagccgctcaactcaagaaagaggcaaaaaag
agggagaagttagagaaattccaacagaaacagaagatccagcagcagcagccaccccct
ggggagcagaagaaaccaaaaccagagaagagggagaaacgggatcctggggtcattacc
tatgacctcccaaccccccctggggagaagaaagatgtcagtggcacgatgcccgactcc
tacagccctcagtacgtcgaggctgcctggtacccttggtgggagcggcagggcttcttc
aagcccgagtatgggcgttccagcgtgtctgcccccaacccccggggcaccttcatgatg
tgcatcccgccccccaacgtgacaggctccctgcacctgggccacgcgctcaccaacgcc
atccaggactccctgacccgatggcaccgcatgcgcggcgagaccaccctgtggaaccca
ggctgcgaccatgcgggcatcgccacccaggtggtggtggagaagaagctctggcgcgag
caggggctgagtcggcaccagctgggccgcgaggcctttctgcgtgaggtctggaagtgg
aaggaggagaaaggtgaccggatttaccaccagctgaagaagctcggcagctccttggac
tgggatcgggcctgtttcaccatggatcccaaactgtcagcaaccgtgatcgaggccttc
gtccggctccacgaggaaggcgtcatctaccgcagtacccgccttgtcaactggtcctgc
accctcaactctgccatctcggacatcgaggtggataagaaggagctgacgggccgcacg
ttgctgtccgtgcctggttacaaggagaaggtggagtttggggtcctcgtctcctttgcc
tacaaggtccaaggctcagacagcgacgaggaggtggtggtggcaacaactcggatcgag
accatgctgggagacgtggctatagctgtgcaccccgaagaccccagataccagcacctg
aaggggaagagtgtggtccacccattcgtgtcccggagcctccccgtcatcttcgatgat
tttgtggacatggagtttggcacaggtgcggtgaagatcacccccgcacacgaccagaac
gactacgaggttgggcagcggcacgggctggaggccgtcagcatcatggacgcgcgaggg
gcccttgtcaacgtgcccccacctttcctgggcctgcccaggttcgaggccagaaaggcg
gtgctggcggcgctaaaggagcggggactcttccgcggcgttgaggacaaccccatggtg
gtgccgctttgcaaccgctccaaggacgtggtggagccgctgctgcggccccagtggtac
gtgcgctgtggggagatggcccaggccgccagtgctgccgtgacgcggggcgacctccgc
atcctgccggaagcccaccagcggacgtggcatgcctggatggacaacatccgggactgg
tgcatctcccggcagctgtggtggggccaccgcatcccggcctacttcgtcaccgtcagc
gacccggctgtccccccaggggaggaccctgatgggcggtactgggtcagtgggcgcacc
gaggccgaggctcgcgagaaggcagccaaggagtttggcgtgtccccggacaagatcagt
ctccagcaagatgaagacgtactggacacttggttctcctccggcctcttccccttctcc
atcctgggctggcccaaccagtcagaagatctgagtgtgttctaccctgggacactgctg
gagacgggccatgacatcctcttcttctgggtggccaggatggtcatgctcggcctgaag
ctcactggcaagctacccttcaaagaggtctatctccacgccatcgtgcgggatgcccac
ggccggaagatgagcaagtctctgggcaacgtcatcgaccccctggacgtcatccacggc
gtctccctgcagggcctgcacaaccagctggtgaacagcaacctggatcccagtgagatg
gagaaggccaaagaggggcagaaggcagatttcccagcggggatccccgaatgcggcacc
gacgctctccgctttggactgtgcgcctacacctcgcagggccgtgatatcaacctggat
gtgaaccggatactggggtaccgccatttctgcaacaagctctggaacgccaccaagttt
gccctccgtggccttgggaagggtttcgtcccctccgccacctccgagcctggaggccgc
gagagcctggcggaccgctggatccgcagccggctgactgaggccgtgaggctcagcaac
cagggtttccaggcctacgacttcccggccgtcaccactgcccagtacagcttctggctg
tacgagctctgtgacgtctacctggagtgcctgaagcctgtgctgaacggggtggaccag
gtggcggccgagagcgcccgccagaccctctacacctgcttggacgtcggcctgcggctg
ctctcacctttcatgcccttcgtgaccgaggagctgtttcagaggctgccccggcggacg
ccgcaggcccctcctagcctctgtgtcacctcctacccggagccttcagagtgctcctgg
aaggaccccgaggcagaggccgccttcgagctggccctgagcatcactcgagctgtgcgc
tccctccgtgccgactacaacctcacccggatccggcccgactgtttcctggaagtggct
gatgaggccacgggtgccctggcatcggcagtgtcaggctacgtgcagacgctggccagc
gctggtatagtagctgttctggctctgggggcttctgcaccccagggctgtgctgtggcc
ctggcctctgaccgctgctccgtccacctgcagctgcaggggctggtagaccccgcccgg
gagctgggcaaactgcaggccaagcgtgacgaggcgcagcggcaggcccagcgtctgcag
gagcgccgtgccgcctccagctactctgtcaaggtgcccctcaaagtccaggaggcagat
gaagctaagctccagcagacggaagcagagctcaggaaggtggaggaggccatcgcccta
tttcagaagatgctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system