KEGG   Sus scrofa (pig): 100511045
Entry
100511045         CDS       T01009                                 
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog isoform X1
  KO
K14764  protein SHQ1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssc03009]
    100511045 (SHQ1)
Ribosome biogenesis [BR:ssc03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    100511045 (SHQ1)
SSDB
Motif
Pfam: SHQ1 SHQ1-like_CS
Other DBs
NCBI-GeneID: 100511045
NCBI-ProteinID: XP_003132372
Ensembl: ENSSSCG00000011518
UniProt: A0A4X1V8R1 F1SFN0
Position
13:complement(54073012..54180759)
AA seq 579 aa
MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGLDFKFYAKPYFLRLTLPGRIVENGR
EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRTAKLLVEEIGVSEVSEEGV
EDDDEEFDWEIEQSPYEEVPESALNPECRYGFGNLRSGVFQRLQDELSEVIDIKDPDFTP
AAERRQKRLAAELAKFDPDHYLADFFEDEAVKQVLEYIPWWTDLYSKIMPSSKRNQEPED
FTALVSFSEEEKYQLRNFVNKSYLLDKRAHRQVYYSLIDILLAYCYETRVTEGEKNVESA
WNIRKLSPTLCWFETWSNVHEILVSFGRRVLCYPLHRHFKLVMEAYRDTIKILQLGKSAV
LKCLLDIHKIFQENDPAYILNDLYISDYCVWIQKAKSKKLSALADALREASLTKAQLGLE
LEELEAAALLVQEEETASTAGAQSVSGQQEAASSSDTSDSEESDSTFSSETDDSDSEEEE
PRDSESGAVNSLLGPFVENSHAALLLDNGLICRDKAPPKSDVCQGQLPAPSLAPGASGPL
IQELGEQLETTVYISEPEGSTAGKQGSIQEKDGQQTLED
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgctgaccccggcgttcgacctcagccaggaccccgacttcctgactatcgccatccgc
gtgccctacgcccgggtctcggagtttgacgtctacttcgaggggctcgacttcaagttc
tacgcgaagccgtactttctcagattaacccttcctggaagaattgtagaaaatggaaga
gagcagggatcctatgatgcagataaaggaatttttaccattcgattgcctaaagaaact
cctggccagcattttgaagggctgaatatgttaactgctctgctggcaccaagaaagtcg
aggactgcaaaactacttgttgaagaaataggtgtttctgaggtttctgaggaaggagta
gaagatgacgatgaagagtttgattgggaaattgaacagtccccctatgaagaggtaccc
gaaagtgctctgaatccagagtgccgctatggatttggaaacttacgatcaggggtgttt
cagcggttacaggatgaattgagtgaggttatcgatattaaggatccagatttcactcct
gcagctgaacgaaggcagaaacgccttgctgctgagctggccaagtttgatcctgatcat
tatctagctgacttttttgaagatgaggcagttaaacaggttttggagtatattccttgg
tggactgatttatattcaaaaattatgccctcttcaaaaaggaatcaggagccagaagat
tttactgcattagtgtctttttctgaagaagagaaatatcagctgcgaaattttgtcaat
aaatcttacctgctagacaagagagcccatcgtcaggtctactacagtttgatagatatc
cttctggcatattgctatgaaacacgtgtcactgaaggagagaagaatgttgaatctgca
tggaatatcagaaaactgagtccaacgctgtgctggtttgagacttggtctaatgttcat
gagatcctggtgtcttttggaagacgagttttgtgctacccacttcaccgccatttcaag
ctggtgatggaagcctacagagacactataaagatattgcaactaggtaaaagtgcagtt
ttaaagtgtctactggacattcacaaaatctttcaggaaaacgatccagcttacattcta
aatgatctctacatatctgactactgtgtgtggattcagaaagccaagtccaaaaagctg
tcagctctcgcagacgccttaagggaagcatccctaaccaaggcccagctgggattagaa
ctggaagaactggaagcagcagcacttctagtccaggaggaagaaactgcatcaacagca
ggagcccagtcagtttctgggcagcaggaggctgcctccagttctgacacaagcgattca
gaggaatcagacagcaccttctcatctgagactgacgactcagactctgaagaagaggag
cccagagacagtgaatctggggcagtaaattccttgcttggtccctttgttgagaacagc
catgctgccctgctccttgacaatggtttgatatgcagagacaaggcccctccgaagtct
gatgtctgtcagggacagctacctgccccttccctggctcctggagcatctgggcccctg
atccaggagctcggagaacagctggagactacagtttacatttccgagcctgagggctcc
actgctggaaagcagggcagcattcaggagaaagatggccagcagacgttagaggattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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