KEGG   Sus scrofa (pig): 100511264
Entry
100511264         CDS       T01009                                 
Symbol
EXOSC10
Name
(RefSeq) LOW QUALITY PROTEIN: exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100511264 (EXOSC10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100511264 (EXOSC10)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     100511264 (EXOSC10)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 100511264
NCBI-ProteinID: XP_013854430
Ensembl: ENSSSCG00000003412
UniProt: A0A4X1W2H0
Position
6:complement(71258988..71282802)
AA seq 886 aa
MAPPSPREPKAPSAKSASKSDGEMVLPGFSDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGXRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVNKNQQPVLPAGLQVPKTIVSSWNRKAGEYSKKTKSETFRLLHAKNI
IRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKDRRERPQDRPEDLDVPPALADF
IHQQRTRQVEQDMFAHPYQYELDHFTPPESVLQKPEPQLYRPVEETPCHFVSSLDELVEL
NEKLLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQ
LADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLALWERGNEQPAQLQVVWQRSRDICLKK
FIKPIFTDESYLDLYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVAAGVRKSGPLPNPE
RLENVLFGPHDCSHTPSDGYPLTPTSGPAAVQARGLLPAGEEEEALLDTRCLIATAVITL
FNEPSAEENGKRPLTVAQKKAQNIMESFENPFRMFLPSLEHRAHISQAAKSDPSSKIFEI
SNRWKLASQVQVQKESKEIAKKKAAEQTAARDQAREEFGAAAAQAVSVRQQAALETAARK
RERVTSDPRTTEQKQEKKRLKISKKPKDPDPSEKEFTPYDYSKSDFKAFAGNSKSKPSFQ
FDPNKQPQSGKKCIAAKKIKQSLGNKSMSFPTGKSDRGFRHNWPKR
NT seq 2661 nt   +upstreamnt  +downstreamnt
atggcgcctcccagtccccgagagcccaaggccccgtcggcgaagagcgcgtccaagtct
gatggggagatggtactaccgggcttctcggacgcagatagcttcgtgaagttcgctctt
gggtcagtggtggcagtcaccaaggcctctgggggccttccacagtttggcgacgagtat
gatttttaccgaagttttcctggcttccaagcattttgtgaaacacaagganacaggttg
cttcagtgcatgagcagggtgatgcagtaccacgggtgtcgaagcaacattaaggaccgg
agtaaagtgactgagctggaggacaagtttgacttgctagttgacaccaatgacgttatt
ctggaaagagtgggcattttattggatgaagcatcaggtgtgaataagaatcaacagccc
gtcctccctgcaggattgcaggtccccaaaaccatcgtgtccagctggaaccgtaaggca
ggagaatatagcaaaaaaacaaaatctgaaactttccggctgcttcatgcaaaaaacatc
atccgacctcagcttaaattccgagagaagatcgacaattccaacacgccatttcttcct
aaaatcttcatcaagcccaatgctcagaaacctctccctcaggctctctctaaggacagg
cgggagcgcccacaggaccggcccgaggacttggatgtgccccctgccctggcggatttc
atccatcagcagaggacccggcaggtggagcaggacatgtttgcacatccttatcagtac
gaactggatcacttcactccaccagagtcagttcttcagaagccagaacctcagttatac
agacctgtagaagagaccccctgccattttgtgtcctcgctggatgagctagtggaactc
aacgaaaagctcctgaagtgccaggaatttgccgtagacttggagcaccactcttatagg
agcttcctggggctcacctgcctgatgcagatttccacccgcacagaagacttcatcatt
gacaccctggagcttcgcagtgacatgtacattctcaacgagagcctcacagacccagct
attgtcaaggtcttccacggggctgattccgacatcgaatggctgcagaaggacttcggg
ttgtacgtggtgaacatgtttgacacccaccaggcagcacgccttctcaacttgggccgg
cactccctcgaccacctgctgaagctctactgcagtgtggaatccaacaagcagtatcag
ctggctgactggagaatacggcctctgcctgaggagatgctcagctacgcccgagatgac
actcactacctgctctacatctacgacaagatgaggctggcactgtgggagcgaggcaac
gagcagcccgcgcagctgcaggtggtgtggcagcggagcagggacatctgcctcaagaaa
ttcatcaaacctatcttcacagacgagtcttaccttgacctgtataggaagcaaaagaag
catctcaacacccagcagttgacagcctttcagctgctgtttgcctggagggacaaaaca
gcccggagggaagatgagagttacggatacgtcctgccaaaccatatgatgctcaagata
gctgaagagctacccaaggagcctcagggcatcatagcgtgctgtaaccctgtgccacct
cttgtacgacagcagatcaatgaaatgcatcttttaatccagcaggctcgagagatgccc
ctgctcaagtctgaagttgcagcgggagtgaggaagagcggacccctgcccaaccctgag
agattggagaatgttctctttggccctcacgactgttcccacaccccgtccgacggctat
cctctcaccccgaccagcgggcccgcggcagtgcaggcccggggccttctccctgccgga
gaggaagaggaggccctgctggacaccagatgcctcatcgccaccgctgtcatcacattg
tttaacgaacctagtgctgaagaaaatggaaagcgtccattaacagtggcacagaaaaaa
gcccagaacataatggagtcctttgagaatccatttaggatgttcctgccttccttggaa
caccgggctcacatctctcaggcagccaagtctgatccctcctcgaaaatctttgaaatc
agcaaccgttggaagctggcaagccaagtacaggtgcaaaaagaatctaaagaaattgcc
aagaagaaggcagctgagcaaacagctgcccgggaccaggccagggaggagttcggagcc
gcagcagcccaggctgtgtccgtgcgccagcaggctgccctggagactgctgccaggaag
agagagcgagtgaccagtgaccccaggacgacagagcagaaacaggagaagaagcgactc
aaaatttccaagaagccaaaagacccagacccctcagaaaaagagtttaccccttatgac
tacagcaagtcggatttcaaggcttttgctggaaacagcaaatccaaaccttctttccag
tttgacccaaacaagcagccccagtctggcaagaaatgcattgcggccaaaaaaattaag
cagtcgctggggaacaaaagcatgtcctttccgactggaaagtctgacagaggtttcaga
cacaactggccgaagagatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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