KEGG   Sus scrofa (pig): 100515613
Entry
100515613         CDS       T01009                                 
Symbol
PINK1
Name
(RefSeq) serine/threonine-protein kinase PINK1, mitochondrial
  KO
K05688  PTEN induced putative kinase 1 [EC:2.7.11.1]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04137  Mitophagy - animal
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    100515613 (PINK1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05012 Parkinson disease
    100515613 (PINK1)
   05014 Amyotrophic lateral sclerosis
    100515613 (PINK1)
   05022 Pathways of neurodegeneration - multiple diseases
    100515613 (PINK1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ssc01001]
    100515613 (PINK1)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100515613 (PINK1)
   03029 Mitochondrial biogenesis [BR:ssc03029]
    100515613 (PINK1)
Enzymes [BR:ssc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     100515613 (PINK1)
Protein kinases [BR:ssc01001]
 Serine/threonine kinases: Other
  NKF2 family
   100515613 (PINK1)
Membrane trafficking [BR:ssc04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    100515613 (PINK1)
Mitochondrial biogenesis [BR:ssc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    100515613 (PINK1)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like
Other DBs
NCBI-GeneID: 100515613
NCBI-ProteinID: XP_020951137
Position
6:78863195..78884663
AA seq 588 aa
MVVRQALGRGLQLGRALLLRFTAKPGPTYAWGRPERPGPAAGWGRGERPGPAAGPGAEPR
RLALGLPGRYRFFRQSVAGLAARLQRQFVVRARGGAGPCGRAVFLAFGLGLGLIEEKQAE
GRRAASACHEIQAIFTQKNKLPPDPLDTRRWQGFQLEEYLIGQSIGQGCSAAVYEATMPV
WPQNLEAAKSTRLLPGRGPEIIPQGEEEALAPQAPAFPLAIKMMWNISAGSSSEAILSTM
SQELVPASRVALAGEYGAVPHRKSRSGPKQLAPHPNIIRVFRAFTSSVPLLPGALVDYPD
VLPPRLHPEGLGHGRTLFLVMKNYPCTLRQYLRGNTPSPRLATVMTLQLLEGVDHLVQQG
VAHRDLKSDNILVELDADGCPWLVIADFGCCLADERVGLQLPFTSWYVDRGGNGCLMAPE
VSTACPGPRAVIDYSKADAWAVGALAYEIFGLSNPFYGQGRAHLESRSYQEAQLPALPES
VPLDVRQLVRSLLQRDASKRPSARVAANVLHLSLWGEDTLALKNLKLDKMVGWLLQQSAA
TLLANRLTEKNCVETKMKMLFLANLEYEALSQAALLLYAWRAAPCQLM
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggtggtgcgacaggctctgggccggggcctgcagctaggccgagcgctgctgctgcgc
ttcacagccaagcctggcccgacctatgcctgggggcggcccgaacgcccgggcccagcg
gcgggctggggccgcggagagcgccctggccctgccgcgggacccggagcggagccgcgc
aggctcgcgctcgggctccccggccgctaccgcttcttccgccagtcagtggccgggctg
gcggcgcggctccagcgacagttcgtagtgcgggcccggggcggcgcgggcccttgcggc
cgggctgtctttctggccttcgggctggggctgggcctcattgaggagaagcaagcggag
ggtcggcgggcggcctccgcctgtcatgagatccaggccattttcacccagaaaaacaag
ctgccgcctgacccgttggacactagacgctggcagggcttccagctggaggagtatctg
atcgggcagtccatcggccagggctgcagcgctgctgtgtatgaggccaccatgcctgtg
tggccccagaacctggaggcggcgaagagcaccaggcttcttcccgggagaggcccagag
atcattccccagggggaagaggaggcactggctccacaggcccccgcctttcccttggcc
atcaagatgatgtggaacatctcggcgggctcgtccagcgaagccatcctcagtacaatg
agccaggagctcgtcccagccagtcgggtggccttggccggggagtatggagcagtccct
cacagaaaatccaggagcggtcccaagcagctggcccctcaccccaacatcatccgggtc
ttccgtgccttcacctcgtctgtgccgctgttgccaggggctctggttgactaccccgat
gtgctgcccccacgtcttcaccccgaaggcctgggccatgggcggacactcttcctcgtc
atgaagaactacccctgtacgctgcgccagtaccttcgcgggaacaccccaagcccacgc
ctcgccactgtgatgacgctgcagctcctggaaggggtggatcacctggtccagcagggc
gtcgctcacagagacctgaagtctgacaacatccttgtggagctggatgcagacggctgc
ccctggttggtgatcgcagacttcggctgctgcctggccgatgagcgcgtgggcctgcag
ctgcctttcaccagctggtacgtggaccgcggcggaaacggctgcctgatggctcctgag
gtgtccacggcctgccctggccccagggcggtgattgactacagcaaggctgacgcctgg
gcggtgggagcgctcgcctacgaaatcttcgggctctccaaccccttttatggccaaggc
agggcccaccttgaaagccgcagttaccaagaagctcagcttccagcgctgcccgaatca
gtgcctctagacgtgagacagctggtgaggtcgctgctccagcgagatgccagcaagagg
ccatccgcccgcgtggctgctaacgtgcttcatttaagcctctggggtgaagatactctg
gccctgaagaacctgaaactagacaagatggtcggctggctcctccagcaatcagctgcc
actctgttggccaacaggctcacagagaagaactgcgtggagacaaaaatgaagatgtta
tttctggccaacctggagtatgaggcgctgagccaggcagccctcctcctctacgcctgg
agggcagccccatgccagctgatgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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