KEGG   Sus scrofa (pig): 100515640
Entry
100515640         CDS       T01009                                 
Symbol
DIS3L
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
  KO
K18681  DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100515640 (DIS3L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100515640 (DIS3L)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     100515640 (DIS3L)
SSDB
Motif
Pfam: RNB OB_Dis3 CSD2 Rrp44_S1 Rrp44_CSD1
Other DBs
NCBI-GeneID: 100515640
NCBI-ProteinID: XP_020955929
Ensembl: ENSSSCG00000004941
Position
1:164310120..164352182
AA seq 1054 aa
MLQKREKVLLLKTFQGRTLRIVREHYLRPSVPCNSPLCPQPASCHNDGKLLSSDVTHYMI
PDWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANE
FQQSCYLPRERGESMEKWQSRSIYNAAVWFYHHCQDRMPVVMVTEDEEAVQQYGSETEGV
FVISFKSYLDNFWPDLKAAHELCESIVQSRRERENESQESHGKEYPEHLPLEVLEAGIKS
GRYIQGILNVNKHRAQIEAFVRLQGASTKDSGLVSDILIHGMKARNRSIHGDVVVVELLP
KNEWKGRTTALGENDGDDKASGESPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGK
NAQKILVTPWDYRIPKIRISTQQAEALQDFRVVVRIDSWESTSMYPNGHFVRVLGRIGDL
EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSEEERKRKDLRKTHLVFSIDPR
GCEDVDDTLSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARSRATTYYLADRRYDMLP
SILSADVCSLLGGVDRYAVSVMWELDKTSHEIKNVWYGRTIIRSAYKLFYEAAQELLDGN
FSIVDDIPEFRDLDDKSRQAKLEELVWAIRKLTDIARHIRAKRDLCGALELEGVEVRIQL
DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL
RECAKAKGFFIDTRSNKTLADSLDNANDPNDPIVNKLLRSMATQAMSNALYFSTGSCAEE
EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMEAISKDKKMEIKENLFSNKDLEELCKHI
NNRNRAAQHCQKQSTELFQCMYFKDKDPDTEERCISDGVIYSIRTNGVLVFIPRFGIKGA
AYLKNKDGLVISCGQDSHCEWKPGSLQRFQNKITSTTTGGESVTFHLFDHITVRISVQAS
RCHADTIRLEIISNKPYMIPDTELFHQSALLLKSDLVKEVTRSVEEAQLAQEVKVNVIEE
DYQKYCQTKGRSLYTLLEEIRDLALLDVSNSYGI
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgctgcagaagcgagagaaggtgctgctcctgaagaccttccagggccggacgctgcgg
atcgtgcgggagcattacctgcggcccagcgtgccctgcaacagcccgctctgccctcag
cccgcctcctgccacaacgatggaaaactcttgtctagtgatgtgactcattacatgatc
ccagattggaaagttgtgcaagattatctcgagatccttgaatttcctgaattgaaggga
attattttcatgcaaactgcttgtcaagctgtgcaacatcaaagaggccggagacagtat
aacaaattgcgaaatctcctgaaggatgcacgtcatgattgcgttctctttgctaatgaa
ttccagcagtcctgctatctccctcgggaaagaggggagtccatggaaaagtggcagagc
aggagcatatacaatgcagctgtttggttctatcaccactgccaggataggatgccagtt
gtcatggtgacagaagatgaagaggcagttcagcagtatggaagtgaaacagaaggagtg
tttgtgatttccttcaagagttacctggacaatttttggcctgatttaaaggccgcccac
gagctttgtgagtctattgttcagtctcgacgggaaagagagaatgagagtcaggagagc
cacgggaaggagtacccagaacatctgcccctggaagtgttggaagctggcattaaatct
gggcgctacattcagggaattctgaatgtcaacaaacacagagcacaaatagaagctttt
gtccgacttcaaggagccagcactaaagattcaggtctagtcagtgacatcctaatccac
gggatgaaggctcgaaaccgctccattcacggagatgtggttgtggtcgaactactccct
aaaaatgaatggaaaggaagaaccaccgccctgggtgagaatgatggtgatgacaaggcc
tcgggggagtcccccagtgagcccatgcccacaggcagagtggtgggcatccttcagaag
aactggcgggattatgtggtgacatttccatccaaagaagaggtccagtctcagggcaaa
aatgctcagaaaatcctagttacaccttgggattacagaattcccaaaatccgaattagc
actcagcaagcagaagccctccaggacttcagggtggttgtgcgcatcgattcgtgggag
tcaacatccatgtatccaaatggacattttgtacgtgttttaggaagaatcggagatctg
gaaggggaaattgcaaccatcctggtggaaaatagtatttcagttgtcccattctctgaa
gctcagatgtgtgagatgccagtaaacacacccgaaaatccctggaaggtgagttctgaa
gaggaacgaaaacgtaaagacctgaggaaaacccatctggtgttcagcattgaccccaga
ggttgtgaagatgtggacgacaccctctcagtcagagccttagataatggcaacctggag
ctcggggttcacattgcagatgtgacgcactttgtggcaccacattcctatattgacatt
gaagccagatcaagggccaccacttactacttagcggaccgccgctatgacatgctgccc
tccatcctcagcgccgatgtgtgctcccttctgggaggtgtggataggtatgctgtaagc
gtcatgtgggaattggataaaacctcccatgaaattaaaaatgtctggtatggcagaacc
attattcgttcagcatacaaactgttttatgaagcagcccaggaactactggacggaaac
ttcagcattgttgatgatattccagaattcagggacttggatgacaagagccgacaagcc
aagctagaggagttagtgtgggccatcagaaagttgactgacatagcccgccacatccga
gccaaacgagacctttgtggtgccctggagctggaaggagtagaggttcgaatccaacta
gatgagaaaaagaacattcatgacctcatccccaagcagcccctggaagtccatgaaacc
gtggctgagtgcatgatcctggccaaccactgggtagccaagaagatctgggagagcttc
cctcaccaggcattgctgcgccagcaccctcctccacaccaggagtttttctctgaactc
cgagagtgtgctaaagcaaagggtttcttcatagatacacggtccaataaaacactggct
gattctctggataatgcaaatgaccccaacgatcccatcgtcaacaagttgcttcgatca
atggctacacaggccatgtctaatgcactgtatttctctactggatcgtgtgccgaggaa
gagttccatcactatggtcttgcattagataaatatactcactttacttctccaataaga
agatattcagatattatagtacaccgattgttaatggaagccatttcaaaagataagaaa
atggaaattaaggaaaatttgttcagcaacaaagatcttgaggaattatgtaaacatatc
aacaacagaaaccgagcagcacagcactgtcagaagcagtctactgagctcttccaatgc
atgtattttaaagacaaagacccagacactgaggagcgttgcatatctgatggggttatt
tattcaattaggacaaatggtgtgcttgtatttataccaaggtttgggattaaaggtgct
gcttatctaaaaaataaagatggtctggtgatctcatgcggccaagatagccattgtgaa
tggaaaccaggatcccttcaacgatttcaaaacaaaatcacctctaccacaacaggagga
gaatctgttacattccacttgtttgaccatataacagtgcgaatatctgtacaggcctcc
cgttgccatgctgatacaataaggcttgaaataataagcaacaaaccatacatgatacca
gatactgaactttttcatcagagtgccctcttgctaaagagtgacttagtaaaagaagta
actagatctgtggaggaagctcagcttgctcaagaagtcaaagtaaatgtcattgaagaa
gactatcaaaaatattgccaaacaaagggaagaagcctatacacacttctagaggagata
agagacctagctctactggatgtttcgaacagttatggaatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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