KEGG   Sus scrofa (pig): 100516909
Entry
100516909         CDS       T01009                                 
Symbol
NUP107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
  KO
K14301  nuclear pore complex protein Nup107
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03013  Nucleocytoplasmic transport
ssc05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100516909 (NUP107)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100516909 (NUP107)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100516909 (NUP107)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100516909 (NUP107)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100516909 (NUP107)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100516909 (NUP107)
SSDB
Motif
Pfam: Nup84_Nup100 HisK_sensor
Other DBs
NCBI-GeneID: 100516909
NCBI-ProteinID: XP_020947628
Ensembl: ENSSSCG00000000486
Position
5:32989661..33040565
AA seq 925 aa
MDRSGFGEMLSPVIREAEVTRTARKQSAQKRVLIRASQDEIFTNTTPRNQVIPRTPSSFR
PPFTPPNRSLLRQPDASSIFGTGGRSPRLTQSSGFLGNLSMVTNLDDSNWAAAFSSQRAG
LFTNTEPHSVTEDVTLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFELVEEYENI
CSSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSALEDENIF
AVTAFNASEKAVVEALFQRDSLVRQCQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENT
LHTLKQRQLPSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRCIWKISCWRMAEDEHF
NRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTLDETEELPR
EYLETNWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSRN
NLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLINEKHTDLIAFYTCHLPQDL
AVAQYALFLEGVTEFEQRHHCLELAKEADLDIATITKTVVENTRKKDNGEFSHHDLAPAL
DTGTTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDSI
AEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLIPQA
TFTEKVAHEHKEKKYEMDYGIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEEDH
ERTHQMVLLRQLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKL
LQKLRESSLMLLDQGLDPLGYEIQS
NT seq 2778 nt   +upstreamnt  +downstreamnt
atggacaggagtggctttggagagatgttatcccctgtgatccgggaggcagaggtgact
cggactgcacgcaaacagagtgcccaaaaaagagttttaattcgggcatcccaagatgaa
atttttactaatactacaccaagaaaccaggttattccccgaactcccagctcatttcga
ccaccttttactccaccaaaccgaagcttactaaggcaaccagatgcttccagcattttt
ggaactggagggaggtctccccggcttacacagtcttctgggttcttgggaaatctgtct
atggtcactaacctggatgatagtaactgggctgctgcattctcatcgcagcgtgcaggg
ctcttcaccaacacagagccccacagtgtaacagaggatgtaacccttagtgctgttatg
ttacgtgaggatgatcctggagaagctgcatccatgagcatgttttctgatttcctgcag
tcttttttgaagcactcttcaactacggtttttgaacttgtagaagagtatgaaaacatt
tgtagtagtcaggtgaatatactgagtaaaatagtgagccgagcaacacctggacttcaa
aagttttcaaaaacagccagtatgctctggcttcttcaacaggaaatggtcacgtggcgg
ctgctggcttcgttgtatagagacagaatacagtctgcattagaagatgaaaatatattt
gcagtgactgcttttaatgccagtgaaaaagcagttgtggaagcattatttcagagggat
tcacttgtccgacaatgtcagctggtggtggattggttagagagcattgccaaagatgag
attggagatttttctgataatattgagttttatgcaaaatcagtatattgggaaaatact
ctgcataccctgaaacagcggcagctaccttcttatataggaagtgtccgtcctcttgtc
actgaattggatcctgatgctcccataagacagaaaatgcccctcgatgatctggataga
gaagatgaagtcagattactcaaatatctcttcactctcattcgtgctggaatgacagaa
gaggcacaacgactctgcaagcgttgtggtcaggcatggagagctgcaacacttgaaggc
tggaaactctaccatgaccccaatgttaatggaggaacagaattagaacctgttgaaggg
aatccttatcgatgcatttggaaaataagttgttggaggatggcagaagatgaacatttt
aatagatacgagagagcaatttatgcagctttaagtgggaatctcaagcagctgcttcct
gtctgtgacacctgggaggatacagtgtgggcctactttcgggtgatggtggacagtctg
gtagaacaggagatccgaacatcagtaatgactctggatgaaactgaagaactccctaga
gaatatttggaaacaaactggaccttagaaaaggtttttgaagaacttcaagctactgat
aaaaagagagttctggaagagaatcaagaacattatcatatagttcaaaaattccttatc
cttggagacattgatggtttgatggatgaatttagcaaatggctttccaagagcagaaac
aatctacctggacaccttctccgcttcatgactcacctcattttgtttttccgcactctg
ggactgcagaccaaagaagaagtttccattgaggttttaaagacatacatacagctttta
ataaatgagaagcatacagatctcatagcattttatacctgtcatttgcctcaagaccta
gctgttgcccagtatgcactatttttggaaggtgttacagaatttgaacagcgccaccat
tgcctggagctggctaaagaagcagatttggatattgcaactataacaaaaactgtagtt
gagaatactcgaaagaaagataatggtgaattcagtcatcatgacctggccccagcccta
gatactggcactacagaggaggaccgtttaaaaattgatgtaattgactggttggtattt
gacccagcacagagagcggaagcactaaaacaaggcaatgcgataatgaggaaattctta
gcatcaaaaaaacacgaagctgcaaaagaagtattcgtgaaaattcctcaggattcaata
gcagaaatctataatcaatgggaggaacaaggaatggagagcccacttcctgctgaagat
gataacgccatccgagaacatttgtgcattagagcttacttggaagcccatgaaaccttt
aatgagtggtttaagcatatgaattcagctccacaaaaacctactttgatacctcaagca
acttttactgagaaagtggctcatgaacacaaagaaaagaaatacgaaatggattacgga
atttggaaagggcacttggatgccctcactgctgatgtgaaggagaaaatgtacaatgtc
ttgttgtttgttgatggagggtggatggtagatgttagagaggatgctgaggaagaccat
gaaagaacacatcaaatggttttactgagacagctttgtctgccaatgttgtgttttctg
ctccacaccatattgcatagtactggtcagtatcaggaatgcctgcagttagcagatatg
gtgtcctctgagcgccacaagctgtatctggtattttctaaggaagaactaaggaaattg
cttcagaagttaagagaatcctctctaatgctcctagaccagggacttgatcctctagga
tatgaaattcaatcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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