KEGG   Sus scrofa (pig): 100517523
Entry
100517523         CDS       T01009                                 
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100517523 (SMC6)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     100517523 (SMC6)
SSDB
Motif
Pfam: AAA_23 SMC_N DUF3993 AAA_21 AAA_29
Other DBs
NCBI-GeneID: 100517523
NCBI-ProteinID: XP_003125390
Ensembl: ENSSSCG00000008614
UniProt: A0A4X1U508 F1SCS4
Position
3:120097361..120170974
AA seq 1097 aa
MAKRKEGNFFSPENAKRPRQEELDDFDKDGDEDECTVSFTNGTSTLTAAEVGIIESIQLK
NFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAIATNRGSSLKGFVKDGQ
NSADISITLRNRGDDAYRANVYGDSIIVQQHISMDGSRSYKLRSQTGAVVSTKKEELIGI
LDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTK
EQINQGEERLTELKRQCLEKEERFQSIAGLSTMKTNLEDLKHEMAWAVVNEIEKQLNAIR
DNIKIGEDRAARLERKTEEQQVRLNEAEKKYKDIQDKLEKISQETNARAPECLALKADLT
SKKRVYNEAEVLYNRSLNEYRALKKDDEQLCKRIEELRKSADQSMEPERLERQKKISWLK
ERVKALQDQEISVNQEIEQFQQAVEKDKEEHTRIKREELDVKQILNYNQKQLKELKDSKT
DRLKRFGPNVPALLEAIDNAYRRGQFTYKPVGPLGACIRLRDPELALAIESCLKGLLQAY
CCHNHADERVLQALMKRFYSPGTSRPQIIVSEFRNEVYDVRHRAAYHPEFPTVLTALEID
NAVVANSLIDMRGIETVLLIKNNSVARAVMQSPKPPKNCREAFTADGDQVFAGRYYSSEN
TRPKFLSRDVDSEISDLENEVENKKAQILNLQQHLCALEKDIKRNEEFLRRCQLHYKELK
MKIRKCLSEIRELENIEEHQSVDIATLEDEAHENKMKMKTVEKNMEKQKEHMEYLKSLKI
EAENKYDAIKLKINQLSEQADPLKDELNLADSEVDNQKRGKRHYEDKQKEHLDTLNKKKR
ELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMRQ
YQEAKETYLDLDNKVRTLKRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAY
CGKMNFDHKNETLTISVQPGEGSKAAFNDMRSLSGGERSFSTVCFILSLWSIAESPFRCL
DEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPPSKLIRILRMSDPERGQ
TTLPFRPVSQEEEEDRS
NT seq 3294 nt   +upstreamnt  +downstreamnt
atggccaaaagaaaggaaggaaatttcttttctcctgaaaatgccaaaagaccaagacaa
gaagagttggatgattttgataaagatggtgatgaagatgaatgtacagtttcttttact
aatggtacctctactttgactgcagcagaagttggaataattgagagtattcagctgaaa
aacttcatgtgtcattcaatgcttggaccctttaaatttggttctaatgtcaactttgtt
gttggcaataatggaagtgggaagagtgcagtactgacagctctcatagttggtcttggt
ggaaaagcaattgctactaatcgaggatcttctttgaaaggttttgtgaaagatggacag
aactcggcagatatctcgataacgttaaggaacagaggggatgacgcctatagagcaaat
gtgtacggtgactctataattgtgcaacagcacatcagcatggatgggagccgatcttat
aaacttcgaagtcaaacaggtgctgtggtttctactaagaaagaagaactgattggaatt
cttgaccattttaacatacaggtagataatccggtttctgttttaacacaagagatgagc
aaacagttcttacagtctaaaaatgagggagacaaatacaaatttttcatgaaagcaacc
caacttgaacaaatgaaagaagattattcatatattatggaaacaaaagagagaacaaag
gagcagataaatcaaggagaagagcgacttactgaattaaagcgccagtgtttggagaaa
gaagaacgttttcaaagtattgctggcttaagtacaatgaagaccaatctagaagacttg
aaacatgaaatggcttgggcagtggtcaatgaaattgaaaagcagttgaatgctatcaga
gataacattaaaattggagaagatcgtgctgctagacttgagagaaaaacagaagaacag
caggtcagacttaatgaagcagaaaaaaaatataaggatattcaagataaactagaaaag
attagtcaagagacaaatgcacgagcaccagaatgtctggcattgaaagcagatcttacg
tctaagaaaagggtatataatgaagctgaggttttatataaccgttccttaaacgaatat
agagcattaaagaaagatgatgaacagctttgcaaaagaattgaagaactgagaaaaagt
gctgatcagtctatggaacctgagcggttggaaaggcaaaaaaaaatatcttggttaaaa
gagagagtaaaggccttacaggatcaagaaatttcagtcaatcaagagattgaacagttt
cagcaagctgtagaaaaggacaaagaagaacataccagaattaagagagaagaattagat
gtgaagcaaatactgaattataatcagaagcaactgaaagaattgaaagatagtaaaact
gatcgactcaaaagatttggccctaatgttccagctcttcttgaagcaatagataatgct
tacagacgagggcaatttacctataaacctgtaggccctttaggagcttgcattcgtctt
cgggaccctgagcttgctttggctattgaatcctgcttaaaaggacttctgcaggcctat
tgttgccataatcatgctgatgaaagagtgcttcaggcactgatgaaaaggttttattca
ccagggacctcacggccacagataatagtttctgaatttcgcaatgaggtgtatgatgta
agacacagagctgcttatcatccagagttcccgacggttctgacagctttagaaatagat
aatgcagttgttgcaaatagcctaattgacatgagaggtatagagacagtgctgctaatc
aaaaataattctgtagctcgtgcagtaatgcagtctccaaagccacccaagaactgtaga
gaagcttttactgctgatggtgatcaggtttttgcagggcgttattattcatctgaaaat
acaagacccaagtttctaagcagagatgtggattctgaaataagtgacttggagaatgag
gtcgaaaataaaaaagcccagatactgaatttacagcaacatttgtgtgctcttgaaaag
gatattaagcgcaatgaagaatttcttagaaggtgtcaactgcattataaagaattaaag
atgaagatcagaaaatgtctttctgaaattcgggaacttgagaatatagaagagcaccag
tctgtagatattgcaaccttggaagatgaagctcatgaaaataaaatgaaaatgaaaaca
gttgagaaaaatatggaaaaacaaaaagaacatatggaatatcttaaaagtctgaaaata
gaagcagaaaacaaatatgatgcaattaaactgaaaattaatcagctgtcagaacaagca
gatccacttaaggatgaattaaaccttgccgattctgaagtggataaccaaaaacgtggg
aagcggcattatgaagacaagcaaaaagaacatttggatactttaaataaaaagaaacgg
gagctagatatgaaagaaaaagaactagaggagaaaatgtcacaagcaagacaaatctgc
ccagagcggatagaagtaaaaaaatctgcatcaattctagacaaagaaattaatagatta
agacagaagatacaggcagaacatgctagtcatggagatcgagaggaaataatgaggcag
tatcaagaagcaaaagaaacctatcttgatctggataacaaagtaaggactttaaaaagg
tttattaaattactggaagaaataatgactcatagatacaaaacatatcaacaatttaga
aggtgtttgactttacgatgcaaattatactttgacaacttattatctcagcgggcctat
tgtggaaaaatgaattttgaccacaagaatgaaactcttactatatcagttcagcctgga
gagggaagcaaagccgctttcaatgacatgaggtctttatctggcggtgaacgttctttt
tccacggtttgcttcattctttctctttggtccattgccgaatctcctttcagatgcctg
gatgagtttgatgtctacatggatatggttaaccggagaattgccatggacatgatactc
aagatggcagattcccagcgcttcagacagtttatcttgcttactcctcaaagcatgagt
tcacttccaccaagtaaactgattagaattcttcgaatgtctgatcctgaaagaggacaa
actacgttgcctttccgacctgtgtctcaagaggaagaagaagaccggagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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