KEGG   Sus scrofa (pig): 100518243
Entry
100518243         CDS       T01009                                 
Symbol
CCNF
Name
(RefSeq) cyclin-F isoform X1
  KO
K10289  F-box protein 1 (cyclin F)
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100518243 (CCNF)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100518243 (CCNF)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     100518243 (CCNF)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    100518243 (CCNF)
SSDB
Motif
Pfam: Cyclin_N Cyclin_C F-box F-box-like Il2rg
Other DBs
NCBI-GeneID: 100518243
NCBI-ProteinID: XP_003124788
Ensembl: ENSSSCG00000026326
UniProt: A0A8D0QBC7 A0A287AJZ4
Position
3:complement(39585597..39603088)
AA seq 788 aa
MGSGGVIHCRCAKCFCYPAKRRIRRRPRNLSILSLPEDVLFHILKWLSVGDILAVRAVHS
HLKDLVDSHASVWACASFQELWPSPRNLRLFERAAEKGNFEAAVKLGIAYLYNEGLSVSD
EARAEVNGLKASRFFSLAERLNAGGAPFIWLFIRPPWSVSGSCCKAVVHESLRAECQLQK
AHRASILHCLGRVLSLFEDEEKQNQARDLFEESAHQGCLTSSYLLWESDRRMDMSDPGRC
LHNFRKLRDFAAKGCWEAQLSLAKACANGNQLGLEAKASSEIVSQLFQASRAVSKQRVFS
VQKGLNDTMRYILIDWLVEVATMKDFSSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM
VICTRFISREILTIREAVWLTDNTYKYEDLVRMMGEVVSALEGRIRVPTVVDYKDVLLTL
VPMAPRTQHLCSFLCELSLLHTSLAAYAPALLATAALLLARLTHGQTQPWTTRLRDLTGF
SCEDLIPCVLSLHQKCFHNDAPKDYRQVSLTAVKQRFEDKRYEEISQEEVLSYGQLCAAL
GVKQESPEPASFLSTGELPAFLSSPSGRRTKRKRENSLQEDRGSFVTTPTAELSSQEEAL
LGSFLDWSLDHCSGYEGDQESEGEKEGDVTAPSGVLDVTVVCLNPEQHCCQESSDEEACP
EDRGRWDAHAAVPGTQTHTPRAPGPALPPCSRRGPGKDGTTSGYSSVSSASPTNSPDGSG
APPQPTSALSLGRDLNTRSCPHPSRKSCLQCRPPSPPESGVPQHQGKRKNLSPHSEEEED
MNLGFLKL
NT seq 2367 nt   +upstreamnt  +downstreamnt
atggggagcggaggggtgatccactgcaggtgtgccaagtgtttctgctatcctgcaaag
cgaagaataaggaggagaccccgaaatctgtccatcttgagtctccctgaagacgtgctc
tttcacatcctgaaatggctctccgtcggtgacatcctcgccgtgcgagctgtgcactcc
cacctgaaggacctggtggacagccatgccagcgtgtgggcgtgtgccagtttccaggag
ctgtggccgtctccaaggaacctgaggctctttgaaagggctgccgaaaaggggaatttc
gaagctgctgtgaagctgggcatcgcctacctctataacgaaggcttgtctgtgtctgat
gaggcccgagcggaagtgaacggcctgaaggcctcccgcttcttcagtcttgccgagcga
ctgaacgcgggtggcgcgcccttcatctggctcttcatccgcccgccttggtcggtgtcc
ggaagctgctgcaaggccgtggtgcacgagagcctcagggcggagtgccagctgcagaaa
gctcacagggcgtctatactgcactgcctcgggagagtcctgagcctcttcgaggatgaa
gagaaacagaaccaggcccgggacctgtttgaagagtctgcccatcaggggtgtttgacc
agctcgtacctcctctgggaaagtgacagaaggatggatatgtcggatcctgggcgatgc
ctccacaacttccggaaactcagggacttcgctgccaaaggctgctgggaagcacagctc
tctttagccaaagcctgtgcgaatggaaaccagctgggacttgaggcgaaagcctccagc
gagattgtgagccagctgttccaggcctcccgcgccgtcagcaagcagagggtcttctcc
gtgcagaagggactcaacgacaccatgaggtacattctgatcgactggctcgtcgaggtg
gccactatgaaggacttctcgagcctgtgccttcacctgaccgtggagtgcgtggaccgc
tacctgcggcggcggctggtgccccggtaccggctccagctgctgggcatcgcctgcatg
gtcatctgtacccggttcatcagcagagagatcctgaccatccgcgaggccgtgtggctc
acggacaacacctacaagtacgaggacttggtgaggatgatgggagaggtcgtctcggcc
ctggaggggaggatccgggtccccaccgtggtcgattacaaggatgtcctgctgacgctg
gtccccatggcaccgagaacccagcacctttgcagcttcctctgcgagctctccctgctg
cacaccagcctggctgcctacgccccggccctcctggccacagctgccctgctcctggcg
aggctgacgcatgggcagacacagccctggaccacgcggttacgggacctcactgggttc
tcctgtgaagacctcataccctgtgtcttaagcctccatcagaagtgcttccacaacgac
gcccccaaggactacaggcaggtctctcttacggccgtgaagcagcgattcgaggacaag
cgctacgaggagatcagccaggaggaggtgctgagctacgggcagctgtgtgcagctctg
ggcgtgaagcaggagagcccagagcccgcgtccttcctcagcaccggggagcttcccgcc
ttcctcagctctccttctggaaggagaaccaagcggaagcgggagaatagcctccaggag
gacaggggcagcttcgtcaccacgcccaccgccgagctgtccagccaggaggaggcgctg
ctgggcagtttcctggactggagcctggaccactgctccggctacgagggcgaccaggag
agtgagggcgagaaggagggcgacgtgacggctcccagcggtgtcctggatgtcactgtg
gtctgcctgaacccagaacagcactgctgccaggagtccagcgacgaggaggcctgccca
gaggacagggggcgctgggacgcgcacgccgcggtgccaggcacgcagacgcacacgccg
cgggccccgggccccgcgctccccccctgcagcaggcgggggccgggcaaggacggcacg
acctcggggtactcctccgtcagcagcgcgagtcccacgaactccccggatggctcgggg
gcccctccgcagcctacctcagcgctgtccctgggccgcgacttgaacacgaggtcctgc
ccccatccctccaggaagtcatgtttacagtgccgccccccaagccccccggagagcggt
gttccccagcaccaggggaagaggaaaaacctgtccccccacagtgaggaggaggaggac
atgaacttgggctttttgaagctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (57)   

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