KEGG   Sus scrofa (pig): 100519993
Entry
100519993         CDS       T01009                                 
Symbol
HOXA2
Name
(RefSeq) homeobox protein Hox-A2
  KO
K09302  homeobox protein HoxA/B2
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100519993 (HOXA2)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    100519993 (HOXA2)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 100519993
NCBI-ProteinID: XP_003134891
Ensembl: ENSSSCG00000016706
UniProt: A0A4X1TPJ8 F1SHT0
Position
18:45470079..45473345
AA seq 380 aa
MNYEFEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLN
PGSHPRHGAGGRPKPSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALPPASAAAAAAA
AAAAATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEI
AALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKSLEDSEKVEEDEEEKSLFEQA
LSVSGALLEREGYTFQQNALSQQQAPNGHNGDSQSFPVSPLTSNEKNLKHFQHQSPTVPN
CLSTMGQNCGSGLNNDSPEALEVPSLQDFNVFSTDSCLQLSDAVSPSLPGSLDSPVDISA
DSFDFFTDTLTTIDLQHLNY
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgaattacgaatttgagcgagagattggttttatcaatagccagccgtcgctcgctgag
tgcctgacatcttttccccctgtcgctgatacatttcaaagttcatcaatcaagacctcg
acgctttcacactcgacactgattcctcctccttttgagcagaccattcccagcctgaac
ccgggcagtcaccctcgccacggcgctggcggccgccctaagccgagccccgcgggcagc
cgcggcagcccagtacccgccggcgccctgcagccgcccgagtacccctggatgaaggag
aagaaggcggccaagaaaaccgcgctgccgcccgcctcggccgccgccgccgccgccgcc
gccgccgccgccgccaccggccctgcctgtctcagccacaaagaatccctggaaatcgcc
gatggcagcggcgggggctcccggcgcctgagaactgcttacaccaacacgcagctttta
gagctggaaaaagaatttcatttcaacaagtacctttgccgaccccgaagggtggagatc
gcagcgctgctggatttgactgagagacaagtgaaagtgtggtttcagaaccggaggatg
aagcacaagaggcagacccagtgcaaggagaaccaaaacagcgaaggaaaatttaagagc
ctggaagactctgagaaagtggaggaggacgaggaagagaagtcgctctttgagcaagcc
ctcagcgtctccggggcccttctggagagggaaggttacacttttcagcaaaatgccctc
tctcagcagcaggctcccaatggacacaatggcgactcccaaagtttcccagtttcgcct
ttaaccagcaatgagaaaaatctgaaacattttcagcaccagtcacccactgttcctaac
tgcttgtcaacaatgggccagaactgtggctcaggcctaaacaatgacagtcccgaggcc
ctcgaggtcccctctttgcaggactttaacgttttctccacagattcctgcctgcagctt
tcagatgcagtctcgcccagtttgccaggttccctcgacagtcccgtagacatttcagct
gacagctttgacttttttacagacacactcaccacaatcgacctgcagcatctgaattac
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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