KEGG   Sus scrofa (pig): 100520856
Entry
100520856         CDS       T01009                                 
Symbol
RFWD2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04115  p53 signaling pathway
ssc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100520856 (RFWD2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    100520856 (RFWD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100520856 (RFWD2)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100520856 (RFWD2)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100520856 (RFWD2)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100520856 (RFWD2)
SSDB
Motif
Pfam: WD40 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 WD40_like zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 100520856
NCBI-ProteinID: XP_020919333
Ensembl: ENSSSCG00000015509 ENSSSCG00000023839
Position
9:complement(117913504..118114268)
AA seq 730 aa
MSGSRQVGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSLAASAAALGSGGAAQAAGSGG
LGGPVRPVLVAAAVSGSAGAVSAGLSRLSCAARPSAGVGGSSSSLGSGSRKRPLLAPLCN
GLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNID
HLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLM
LELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSG
LYSPVSEDSTVPQFEAPSPSHSSIIDSTEYIQPPGFSGSSQTKKQPWYNSTLASRRKRLT
AHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGS
SIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSY
HKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLW
STNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA
VSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSEN
NSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANS
QGTIKVLELV
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgtctgggagccgccaggtcggttcgggctccgcagggaccagccctggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttatcctcttccccgtcgcccccttccttg
gcagcttcggcggcggcgctggggtccggcggggcggcccaggccgcgggctctggcggc
ctcgggggcccggtgcggcctgtgctggtggcggccgccgtgtccggcagcgccggggcg
gtgtccgcgggcctgtcccggctgagctgcgccgccaggcccagcgctggcgtaggaggg
agcagctccagcctaggcagcggcagcaggaagcgacctctgctcgcccccctgtgcaac
gggctcatcaactcctatgaggacaaaagcaacgacttcgtctgccctatctgctttgat
atgattgaggaagcatacatgacaaaatgtggccacagcttttgctacaagtgtattcat
cagagtttggaggataataatagatgtcccaagtgtaactatgttgtggataatattgat
catctgtatcctaatttcttggtgaatgaactcattcttaaacagaagcaaagatttgag
gaaaagaggttcaaattggaccactcagtgagtagcaccaatggccacaggtggcagata
tttcaggatttgttgggaactgaccaagataaccttgatttggccaatgtcaaccttatg
ttggagttactagtgcagaagaagaaacaactggaagcagagtcacatgcagcccaacta
cagatccttatggaattcctcaaggttgcaagaagaaataaaagagagcaactggagcag
atccagaaggagctaagtgttttggaagaggatatcaaaagagtggaagaaatgagtggc
ttatactctcctgtcagtgaggatagcacagtgcctcaatttgaagctccttctccatca
cacagtagtattattgattccacagaatacatccaacctccaggtttcagtggcagttct
cagacaaagaaacagccctggtataacagcacattagcatcaagacgaaaacgactcact
gctcattttgaagacttagagcaatgttacttttctacaaggatgtctcgtatctcagat
gacagtcgaactgcaagccagttggatgaatttcaggaatgcttgtccaagtttactcga
tataattcagtacgacctttggctacgttatcatatgctagtgatctctataatggttcc
agcatagtttcaagtatcgaatttgacagagattgtgactactttgcaattgctggggtt
acaaagaagattaaagtctatgaatatggcacagtcattcaggatgcagtggatattcat
taccctgaaaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagttac
cataagaacctgttagccagcagtgattatgaaggcactgtcatcctgtgggatggattc
acaggacagaggtcaaaggtctatcaggagcatgagaagaggtgttggagtgttgacttt
aatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagctatgg
tctaccaacttagacaactcagtggcaagcattgaggcgaaggctaatgtgtgctgcgtt
aaattcagcccctcttctagataccatttggctttcggctgtgcagatcactgtgttcac
tactatgatcttcgtaacactaaacagccaatcatggtattcaaaggacaccgaaaagca
gtctcttacgcaaagtttgtgagcggtgaggaaattgtgtctgcttcaacagacagccag
ctaaagctgtggaatgtagggaaaccatactgtctacgttccttcaaaggtcatattaat
gaaaaaaactttgtaggcctcgcttccaatggagattatatagcctgtggaagcgagaac
aactctctttacctgtactataaaggactttctaagactttgctaacttttaagtttgat
acggtcaaaagtgtcctggacaaagaccgaaaagaagatgatacaaatgaatttgttagt
gccgtgtgctggagggcactaccagatggggagtccaatgtgctgattgctgctaacagt
cagggtacaattaaggtgctggaattggtatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (56)   

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