KEGG   Sus scrofa (pig): 100522971
Entry
100522971         CDS       T01009                                 
Symbol
CAPN6
Name
(RefSeq) calpain-6
  KO
K08575  calpain-6 [EC:3.4.22.-]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    100522971 (CAPN6)
Peptidases and inhibitors [BR:ssc01002]
 Cysteine peptidases
  Family C2: calpain family
   100522971 (CAPN6)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III C2
Other DBs
NCBI-GeneID: 100522971
NCBI-ProteinID: XP_003135366
Ensembl: ENSSSCG00000012584
Vega: OTTSUSG00000004787
UniProt: F1RWU4 A0A4X1W4M4
Position
X:complement(91258696..91288128)
AA seq 641 aa
MGPPLKLFKNQKYQELKQECIRDGRLFCDPTFLPENDSLFYNRLLPGKVVWKRPQDICDD
PRLIVGNISNHQLIQGRLGHKPMVSAFSCLAVQESHWTKTIPNHKEQEWDPRKLDKYAGI
FHFRFWHFGEWTEVVIDDLLPTINGDLVFSFSTSMNEFWNALLEKAYAKLLGCYEALDGL
TTTDIIVDFTGTLAETVDMQKGRYTELVEEKYKLFGELYKTFTKGGLICCSIESPNQEEQ
EVETDWGLLKGHTYTMTDIRKIRLGERLVEVFSTEKLYMVRLRNPLGRQEWSGPWSEISE
EWQQLTAADRKNLGLVMSDDGEFWMSLEDFCRNFHELSVCRNVNNPIFGRKELESVVGCW
TVDDDPLMNRSGGCYNNRDTFLQNPQYIFTVPEDGHKVIMSLQQKDLRTYRRMGRPDNYI
IGFELFKVEMNRKFRLHHLYIQERAGTSTYIDTRTVFLSKYLKKGNYVLVPTMFQHGRTS
EFLLRIFSEVPVQLRELTLDMPKMSCWNLARGYPKVVTQITVHSAEGLEKKYANETVNPY
LVIKCGKEEVRSPVQKNTVHAIFDTQAIFYRRTTDIPIIVQVWNRRKFCDQFLGQVTLDA
DPSDCRDLKSLYLRKKGGPTAKVKQGHISFKVISSDDLTEL
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgggtccccccctgaagctcttcaaaaaccagaagtaccaggaactgaagcaggaatgc
atcagggatggaagacttttctgcgatccaacctttttgcctgagaacgattcacttttc
tacaaccgactgcttcccgggaaagtggtgtggaaacgcccccaggacatctgcgatgat
ccccgtctgattgtgggcaatatcagcaaccaccagctgatccaagggagactgggacac
aagccaatggtctctgcgttttcctgtttggctgttcaggagtctcactggacaaagaca
attcccaaccataaggaacaggaatgggaccctcgaaaactagataaatatgctgggata
tttcacttccgtttctggcattttggagaatggactgaggtggtgattgatgacttgctg
cccaccatcaatggagacctcgttttctccttctccacctccatgaacgagttctggaat
gctctactggaaaaagcttatgccaagctgctcggctgttacgaagccctcgatgggttg
accaccactgatattatagtggactttactggcacgttggccgaaactgttgacatgcag
aagggcagatacaccgagctggttgaggagaagtacaagctgtttggagagctgtacaaa
acctttaccaaaggaggtctgatctgttgctccattgagtcacctaatcaggaggaacaa
gaagttgaaactgattggggtctactgaagggccatacctacaccatgactgatattcgc
aagatccgtctgggagaaagacttgtggaagtcttcagtactgagaagctgtacatggtt
cgcctgaggaaccccttgggaagacaggaatggagtggcccctggagtgagatttctgaa
gagtggcagcaactgacggcagcagaccgcaagaacctgggccttgtcatgtctgatgat
ggagagttttggatgagcctggaggacttttgccgcaacttccatgaactgagtgtctgc
cgcaacgtgaacaaccctatttttggccgcaaggagctggaatcggtggtgggatgctgg
actgtggatgatgatcccctgatgaaccgctccggaggctgctataacaaccgggatacc
ttcctgcagaatccccagtacatcttcactgtgcccgaggatgggcacaaggtcatcatg
tctctgcagcaaaaggacctgcgtacttaccgccgcatgggaagacccgacaattacatc
atcggctttgagctcttcaaggtggagatgaaccgcaaattccgcctccaccacctctac
atccaggagcgtgcggggacttccacttacattgacacgcgcaccgtgtttctgagcaag
tacctgaagaagggcaactacgtgcttgtccccaccatgttccagcatggccgcaccagc
gagtttctcctgagaatcttctccgaagtgcctgtccagctcagggagctgactctggac
atgcccaagatgtcctgctggaatctggctcgtggctacccgaaggtagtcacccagatc
acagtgcacagcgctgagggcctggagaagaagtatgccaatgaaactgtaaacccatat
ttggtcatcaagtgcgggaaggaagaagttcgttctcccgtccaaaagaatactgttcac
gccatttttgacacccaggccatattctacagaaggaccactgacattcctattatagtg
caggtctggaacagacgaaaattctgcgatcagttcttgggacaggtaactctggatgcc
gaccccagtgactgccgtgatctgaagtccctgtacctgcgtaagaagggtggcccgact
gccaaagttaaacaaggccacatcagcttcaaggttatttccagtgatgacctcaccgag
ctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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