KEGG   Sus scrofa (pig): 100523408
Entry
100523408         CDS       T01009                                 
Symbol
CDH12
Name
(RefSeq) cadherin-12 isoform X1
  KO
K06804  cadherin 12, type 2, N-cadherin 2
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    100523408 (CDH12)
Cell adhesion molecules [BR:ssc04515]
 Cadherins
  Major cadherins
   100523408 (CDH12)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_2 Stevor Cadherin_4 DUF443
Other DBs
NCBI-GeneID: 100523408
NCBI-ProteinID: XP_005672455
UniProt: F1SRL7 A0A8D0JF80
Position
16:complement(9985759..10975489)
AA seq 794 aa
MLTRNCLSLLLWVLFDGGLLTPLQPQPQQTLATEPRENVIHLPGRRPHFQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQ
NAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SAGPFKDTATVKISVLDVDEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRY
FIDWKSDGDSYFTIDGTEGTIATNELLDRESTAQYNFSIIASKVSNPLLTSRVNILINVL
DVNEFPPEISVPYETAVCENAKPGQIIQIVSAADRDLSPAGQQFSFKLSPEAAIKPNFTV
RDFRNNTAGIETQRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIIILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDSLCLPRQRPPVEDNTDIRDFINQR
LQENDMDPAAPPYDSLATYAYEGNGSAADSLSSIESLTTEADQDYNYLTDWGPRFKVLAD
MFGEEESYNPDKVT
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgcttacaaggaactgtttatccctgcttctctgggtcctgtttgatggaggtctccta
acaccacttcaacctcagccacaacagactttagccacagaaccaagagagaatgttatc
catctgccagggcggcggccacatttccaacgagttaaacgtggctgggtatggaatcag
ttttttgtgctggaggaatacatgggctccgagcctcagtatgtgggaaagctccattct
gacttagataagggagagggcactgttaaatacaccctctcaggagatggcgctggcacc
gtttttacaattgatgaaactacaggggacattcatgcaataaggagcctggatagagaa
gaaaaacctttctacacacttcgcgctcaggctgtggacatagaaaccaggaagcccctg
gagcctgaatcagaatttatcatcaaagtgcaggatattaacgataatgagccaaagttt
ttggatggaccttacatcgctagtgttccagaaatgtctcctgtgggtgcatatgtactc
caggtcaaggccacagatgcagatgatccaacctatggaaacagtgccagagtggtttac
agcattcttcagggacaaccttatttctctattgatcccaagacaggtgttattaggacc
gctttgccaaacatggacagggaagtcaaagaacaataccaagtcctcatccaagccaag
gatatgggcggacaactgggagggttggccggaacgacaatagtcaatatcaccctcacg
gatgtcaatgacaacccacctcgattccccaaaagcatcttccatctgaaagttcctgag
tcttctcctattggttcagctattggaagaataagagctgtggaccctgattttggacaa
aatgcagagattgaatacaatattgttccaggagatgggggaaatttgtttgacatcgtc
acagatgaggatacacaagaaggagtcatcaaattaaaaaagccattagattttgaaaca
aagaaggcttacacttttaaagtagaggcgtccaacctccaccttgaccaccggtttcac
tccgccggccctttcaaagacacagccacagtgaaaatcagcgtgctggacgtggacgag
ccgccggtcttcagcaagccgctgtacaccatggaggtgtatgaggacactccagttggg
accatcattggggccgtcactgcccaagacctcgatgtgggcagcagtgccgttaggtac
ttcatagattggaagagtgatggggacagctactttacaatagatggaactgaaggaacc
atcgccactaatgaattactagacagagaaagcaccgcacagtataatttctccataatt
gcgagtaaagttagtaatccgttattaaccagcagagtcaacatactgattaatgtccta
gatgtcaatgaatttcccccagaaatatctgtgccatatgagacggctgtgtgtgaaaat
gccaaaccaggacagataattcagatagtcagcgctgcagaccgtgatctttctcctgct
gggcagcaattctcctttaaattatcacctgaagctgccatcaaaccaaattttacagtt
cgtgacttcagaaacaacacagctggaattgaaacacaaagaaatggatacagccgcagg
cagcaagagttgtatttcctccctgttgtcatagaagacagcagttatcctgtccagagc
agtacaaacacaatgactattcgagtgtgtagatgtgactctgatggtaccatcctgtct
tgtaacgtggaagcaatttttctacctgtaggactcagcactggggctttgattgcaatc
ctactgtgcatcattatactcttagccattgttgtgctgtatgttgctttacgaaggcag
aagaagaaagacaccctgatgacgtctaaagaagacatcagagacaacgtcatccattat
gatgatgaagggggcggggaggaggacacccaggcttttgacattggtgctctgagaaac
ccaaaagtgattgaagataacaaaatccgcagggatataaaaccagactctctctgttta
cctcgtcagagaccacctgtggaagataacacagacataagggatttcattaatcaaagg
ctacaagaaaatgatatggaccctgccgccccaccgtatgattctctggcgacatatgcc
tatgaaggcaatggatccgcagcggactcccttagctccatagagtctctgaccacggaa
gctgaccaggactacaactatctgacagactggggaccccgctttaaagtcttggcagac
atgtttggtgaagaagagagttataaccctgataaagtcacttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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