KEGG   Sus scrofa (pig): 100524450
Entry
100524450         CDS       T01009                                 
Symbol
ABRAXAS1
Name
(RefSeq) BRCA1-A complex subunit Abraxas isoform X1
  KO
K20774  BRCA1-A complex subunit Abraxas
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100524450 (ABRAXAS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100524450 (ABRAXAS1)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     100524450 (ABRAXAS1)
SSDB
Motif
Pfam: MPN_2A_DUB_like Zw10_N Cluap1 DUF3461 FapA DUF2096 PRC2_HTH_1 SpoVR DUF16 DUF948 TMPIT
Other DBs
NCBI-GeneID: 100524450
NCBI-ProteinID: XP_003129396
Ensembl: ENSSSCG00000009234
UniProt: F1RW10
Position
8:135002297..135021205
AA seq 409 aa
MEGESTSAVLSGFVLGALAFQHLNTDSDTEGFLLGEVKGEAKNSITDSQMDDVEVIYTID
VQKYIPCYQLFSFYNSSGEVNEQALKKILSSVKKDVVGWYKFRRHSDQVMTFRERLLHRN
LQKHLSSQELVFLLLTPSIITESCSTHRLEHALYKPQKGLFHRIPLVVANLGMSEQLGYK
TVSGSCMSAGFSRAVKTHSSEFFKEDGSLKEVHKINEMYASLQEELKSICKKVEHSERAV
EKLLKDVNRLKQEIKKRKQAQIQAAREKNVQKDPQENVFLCQALRTIFPDCEFLHSCVVS
LKNRHISKSTCNTTHHVSVDGLTLLVEYTDSPEASPAGSTLQTSKRKASDADDGGRSKKS
RLLELQNKPSKADTDSSDQEKASTMSSPEADEELEKRKGSGEYPQSPTF
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggagggggagagcacgtcggcggtgctctctggttttgtgctcggcgctctcgccttc
cagcacctcaacaccgactcggacacggaaggttttctccttggggaggtgaaaggtgaa
gctaagaacagcataactgattcccaaatggatgatgttgaagttatttatacaattgat
gttcagaaatacattccatgctatcagctctttagcttttacaattcttctggtgaagtc
aatgagcaagcgctgaagaaaatattatcaagtgtcaaaaaggatgtagttggttggtac
aaattccgacgtcattcagatcaggtcatgacatttagagagaggctccttcacagaaat
ttacagaagcatctttcaagccaggaacttgtttttctgttattaacaccgagtataata
acagaaagctgctctactcatcggctggagcatgccttgtataaacctcagaaaggactt
tttcatagaatacctttagtggtggccaatctgggcatgtctgaacaactgggttataaa
actgtatctggttcctgtatgtctgctggttttagtcgagcagtaaaaacacacagctct
gaattttttaaagaagatggatctttaaaggaggtacataagataaatgaaatgtatgct
tctttacaagaagaattaaagagtatatgcaaaaaagtggaacacagtgagagagcagta
gagaaactgctaaaggacgtaaacagattaaaacaggaaattaaaaaaagaaaacaagca
cagattcaagcagcacgagagaagaatgtacaaaaagaccctcaggagaacgtttttctt
tgtcaagctttacggaccatttttccagattgtgaatttcttcattcatgtgttgtttct
ttgaaaaataggcatatttctaaaagtacttgtaataccacccaccatgtcagcgtggat
ggcctgaccctactggtggagtacactgacagtccggaagctagtcctgctggtagcaca
ctgcagacgagtaagcgcaaggcttctgatgcagatgacggagggcgatccaagaagtca
cggctgttagagctgcagaacaaaccatctaaggcagatactgacagcagcgaccaggaa
aaggcatccacaatgagtagcccagaagcagatgaagagcttgagaaaaggaagggctct
ggtgaatatccacagtctccgaccttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (11)   
   Pfam (11)   
All databases (34)   

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