KEGG   Sus scrofa (pig): 100621229
Entry
100621229         CDS       T01009                                 
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100621229 (SNF8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100621229 (SNF8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100621229 (SNF8)
Membrane trafficking [BR:ssc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    100621229 (SNF8)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100621229 (SNF8)
SSDB
Motif
Pfam: EAP30 AbiEi_4 EutK_C TFIIE_alpha RPA_interact_C Plasmid_RAQPRD DUF4896
Other DBs
NCBI-GeneID: 100621229
NCBI-ProteinID: XP_003358131
Ensembl: ENSSSCG00000021461
UniProt: I3L6X7 A0A4X1UL97
Position
12:complement(25142748..25152847)
AA seq 258 aa
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFSIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKNGYVTVSDIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF
TDLYSQEITAEEAREALP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcaccgccgcggggtgggcgctggcgccatcgccaagaagaagcttgccgaggccaag
tataaggagcgagggactgtcttggctgaggaccaactggcccagatgtcaaagcagttg
gacatgttcaagaccaacctggaagaatttgctagcaagcacaagcaggagatccggaag
aatcccgagttccgggtgcagttccaggacatgtgtgccaccattggggtggatcctctg
gcctctggaaaaggattttggtctgagatgctaggcgtgggagatttctattacgagctg
ggtgtccagattatcgaagtatgcctggccctgaagcaccggaatggaggtctgataact
ctggaagaactacatcaacaggtgttgaaaggcaggggcaaattcgcccaggatgtcagc
caagacgacctgatcagagccatcaagaaactaaaggcccttggcaccggcttcagcatc
atccctgtgggcggcacgtacctcattcagtctgttccagccgagctcaatatggatcac
actgtggtgctgcagttggcagagaaaaacggctacgtgactgtcagtgatatcaaagcc
agtcttaaatgggagaccgagcgagcgcgacaagtgctggaacacctgctgaaggaagga
ctggcttggctggatctgcaggccccaggggaggcccactactggctgccggctctcttc
acggacctctactcccaggagattacagctgaggaggccagagaagccctcccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

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