KEGG   Sus scrofa (pig): 100624579
Entry
100624579         CDS       T01009                                 
Symbol
PLXNA1
Name
(RefSeq) plexin-A1 isoform X1
  KO
K06820  plexin A
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    100624579 (PLXNA1)
SSDB
Motif
Pfam: Plexin_cytopl TIG Plexin_RBD Sema TIG_plexin TIG_2 PSI RasGAP
Other DBs
NCBI-GeneID: 100624579
NCBI-ProteinID: XP_020925109
Position
13:complement(73054434..73098786)
AA seq 1909 aa
MYVPTGPERLGPGTQSIMPLASLSPRAPLPLLLLLLLGGTPRAGGGPQPPFRTFTASDWA
LTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGLGS
TDNVNKLLLLDQAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSGVREPGSMA
GVLIAGPPGQAQAKLFVGTPIDGKSEYFPTLSSRRLMANEEDAEMFGFVYQDEFVSSQLK
IPSDTLSKFPAFDIYYVYSFRSEHFVYYLTLQLDTQLTSPDAAGEHFFTSKIVRLCVDDP
KFYSYVEFPIGCEQAGVEYRLVQDAYLSRPGRALARQLGLAEDEDVLFTVFAQGQKNRVK
PPRESVLCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDDFCGQD
FNQPLGGTVTIEGTPLFVDKDDGLTAVAAYDYRGRTVVFVGTRSGRIRKILVDLANPGGR
PALAYESVVAQEGNPILRDLVLSPDRQYLYAMTEKQVTRVPVESCVQYTSCELCLGSRDP
HCGWCVLHSICSRQDACERADEPQRFAADLLQCVQLAVQPRNVSVTMSQVPLVLQAWNVP
DLSAGVNCSFEDFTESEGILEDGRIHCRSPSAREVAPITRGQGDQRVVKLYLKSKETGKK
FASVDFVFYNCSVHQSCLSCVNGSFPCHWCKYRHVCTHNAADCAFLEGRVNVSEDCPQIL
PSTQIYVPAGVVKPITLAARNLPQPQSGQRGYECLFHTPGSPARVAALRFNSSSLQCQNS
SYSYEGNDVSDLPVNLSVVWNGHFVIDNPQNIQGEPAHLYKCPALRESCGLCLKADPRFE
CGWCVAERRCSLRPHCPADFPAAWMHARHGSSRCADPKIFKLSPETGPRQGGTRLTITGE
NLGLRFEDVRLGVRVGKVLCSPVESEYISAEQIVCEIGDASTVRAHDALVEVCVRDCSPH
YRALSPKRFTFVTPTFYRVSPARGPLSGGTWIGIEGSHLNAGSDVAVSVGGRPCSFSWRN
SREIRCLTPPGQSPGSAPIVININRAQLTNPEVKYNYTEDPTILKIDPEWSINSGGTLLT
VTGTNLATVREPRIRAKYGGVERENSCLVYNDTTMVCRAPSVDNPARSPPELGERPDELG
FVMDDVRALLVLNTSSFLYYPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLN
YTVLIGSTPCALTVSETQLLCESPNLTGQHKVTVRAGGFEFSPGVLQVYSDSLLTLPAIV
GIGGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDI
HELTNDLDGAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTKKHF
LLTFIRTLEAQRSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPK
LLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYS
LSEDKLIRQQIDYKTLTLNCVNPENENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVPYSQ
RPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQTSA
YNISNSSTFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLDQRE
GDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQAD
QHQIHDADVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTS
EHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFN
SMSALHEIYSYISKYKDEILTALEKDEQARRQRLRSKLEQVVDTMALSS
NT seq 5730 nt   +upstreamnt  +downstreamnt
atgtatgtgcccacaggacctgagcgccttggccccgggacccagtccatcatgccactg
gcatctctgagccctcgggcaccactgccgctgctgctcctgctgctgctggggggcaca
ccccgggcaggcgggggtccacagccccctttccgcaccttcacggccagcgactgggcc
ctcacccacctggtggtccatgagcagacgggtgaggtgtatgtgggtgccgtgaaccgc
atctacaagctgtcagggaatctgacgctgctgcgtgcgcacgtgacaggccccgtggaa
gacaacgagaagtgctacccgccgcccagcgtgcagtcctgcccacacggcctgggcagc
accgacaatgtcaacaagctgctgctgctagatcaggctgccaaccgcctgctggcctgc
ggcagtgcctcacagggcatctgccagttcctgaggttggacgacctcttcaagctgggt
gagccacaccaccgcaaggagcactacctgtcgggtgtgcgcgagccgggcagcatggca
ggcgtgctgatcgccgggccgccaggccaggcgcaggccaagctcttcgtgggcacgccc
attgatggcaagtctgagtacttccccacgctgtccagccggcggctcatggccaatgag
gaggacgccgaaatgttcggcttcgtgtaccaggacgagttcgtgtcctcgcagctcaaa
atcccctcagacacgctgtccaagttcccagccttcgacatctactacgtgtatagcttc
cgcagcgagcacttcgtttactacctcaccctgcagctggacacgcagctcacctcgcct
gacgctgccggcgagcacttcttcacgtccaagatcgtgcggctgtgcgtggacgacccc
aagttctactcctatgtcgagttccccatcggctgtgagcaggcaggagtggagtaccgc
ctggtgcaggatgcctacctgagccggcccggtcgcgccctggcccgccagctgggcctg
gctgaggatgaggacgtgctgttcaccgtgttcgcccagggccagaagaaccgtgtgaag
ccgccccgggagtcagtcctgtgcctcttcacactcagggccatcaaggagaagatcaag
gagcgcatccagtcctgctaccgtggggagggcaagctctcgctgccctggctgctcaac
aaggagctgggctgcatcaactcgcccctgcagattgacgacgacttctgtgggcaagac
ttcaaccagccactgggtggcacagtcaccatcgagggtacgcccctgttcgtggacaag
gatgatggcctgaccgccgtggccgcctacgactatcggggccgcactgtggtgttcgtg
ggcacacgaagcggccgcatccgcaagatcctcgtggacctggcgaacccaggaggccgg
ccagccctggcctacgagagcgtagtggcccaagagggcaaccccatcctgcgtgacctg
gtcctcagcccagaccgccagtacctctacgccatgacggagaagcaggtgacccgcgtg
cctgtggaaagctgcgtgcagtacacgtcctgtgagctgtgcctggggtcacgggacccc
cactgcggctggtgtgtcctgcacagcatctgctcacgtcaggatgcctgtgagcgggcg
gacgagccccagcgcttcgctgcggacctgctacagtgtgtgcaattggccgtgcagcca
cgcaatgtgtctgtcactatgtcccaggttccgctcgtgctgcaggcctggaatgtacct
gacctctcggctggagtcaactgctcctttgaggacttcaccgaatctgagggcatcctg
gaggacggccggatccactgccgctccccctccgcacgggaggtggcgcccatcacgcgg
ggccagggagaccagcgggtggtcaagctgtacctaaagtccaaggagacgggcaagaag
tttgcgtccgtggacttcgtcttctacaactgcagcgtccaccagtcctgtctgtcctgc
gtcaacggctccttcccctgccactggtgcaagtaccgccacgtgtgcactcacaacgcc
gccgactgtgccttcctggagggccgcgtcaatgtgtctgaggattgcccgcagatcctg
ccctccacccagatctatgtgccagcgggtgtggtgaagcccatcaccctggctgctcgg
aatctgccacagccacagtcgggccagcgtgggtacgagtgcctgttccacaccccaggg
agcccggcccgtgttgctgccctgcgcttcaacagctcaagcctgcagtgccagaactcg
tcgtactcctacgagggcaatgatgtcagtgacctgcccgtgaacctgtctgtggtgtgg
aatggccacttcgtcattgacaacccgcagaacatccagggtgagccagcccacctgtac
aagtgcccggcactgcgggaaagctgcggcctctgcctcaaggccgaccctcgctttgag
tgtggctggtgtgtggccgagcgccgctgctccctgcgcccccactgtcctgcagacttt
cccgctgcctggatgcacgcgcgccatggcagcagccgctgcgcggaccccaagatcttc
aagctgtcccctgagacaggcccacggcagggcggcacacggctcaccatcacgggcgag
aacctagggctgcgctttgaggacgtgcggctgggtgtgcgcgtgggcaaggtgctatgc
agccccgtggagagcgagtacatcagtgctgaacagatcgtctgtgaaatcggagatgcc
agcaccgtccgggcccatgacgccctggtggaggtttgcgtgcgggactgctccccccac
taccgggccctgtcgcccaaacgcttcacctttgtgactccaactttctaccgtgtgagc
cctgcccgcgggcccctttcggggggcacctggattggcatcgagggtagccacctgaac
gcaggcagtgacgtggctgtgtctgttggcggccggccctgctcattctcctggaggaat
tcccgggagatccggtgcctgacaccccctgggcagagccctggcagtgcccccatcgtc
atcaatatcaaccgtgctcagctcaccaatcctgaggtcaagtacaactacacagaggac
cccactatcctgaagattgatcccgagtggagcatcaacagtggagggaccctcctaaca
gtcacaggcactaatctggccactgtccgtgaaccccgcatccgggccaagtatggaggc
gtcgagagggagaacagctgcctggtgtacaacgacaccaccatggtgtgccgggcccca
tcggtggacaaccccgcccgcagcccgcctgagctgggggagcggcccgacgagctgggc
ttcgtcatggacgacgtgcgcgccctgctcgtgctcaacacctcatctttcctctactac
ccggaccctgtgttggagccgctcagccccacgggccttctggagctgaaacccagctcc
cccctcatcctcaagggccgcaacctcctgccgccagcacctggcaactcccggctcaac
tatacagtgctcatcggctccacgccctgtgccctcaccgtttcagagactcagctgctc
tgcgagtcacccaacctcaccgggcagcacaaggtcacggtccgggccggtggcttcgag
ttctcgccaggggtgctgcaggtgtactcggacagcttgctgacgctgcctgccattgtg
ggcatcggcgggggcgggggcctcctactgctggtcattgtggctgtgctcatcgcctat
aagcgcaaatcacgggacgctgaccgcaccctcaagcgcctgcagctccagatggacaac
ctggaatcccgcgtggcccttgagtgcaaggaagcctttgcagagctgcagacagacatc
catgagctgaccaacgacctggatggcgcaggcatccccttcctcgactaccggacgtat
gccatgcgtgtgcttttccctgggattgaggaccacccggtgctcaaggagatggaggtg
caggccaatgtggagaagtcgttgacactgttcgggcagctgctgaccaagaagcacttc
ctgctgaccttcatccgcaccctggaggcccagcgcagcttctccatgcgcgaccgtggc
aacgtggcctcgctcatcatgacagccctgcagggcgagatggagtatgcgacgggagtg
ctcaagcagttgctgtccgacctcatcgagaagaacctggagagcaagaaccaccccaag
ctgctgctgcggcggactgagtcggtggcagagaagatgctgactaactggttcaccttc
cttctgtacaagttcctcaaggagtgcgcgggggagcctctctttatgctctactgcgcc
atcaagcagcagatggagaagggccccatcgatgccatcacgggtgaggcgcgctactcc
ctgagcgaggacaagctcatccggcagcagatcgactacaagacactgaccctgaactgc
gtgaatcctgagaacgagaatgcgcctgaggtgccggtgaaggggctgaactgcgacaca
gtgacacaagtcaaggagaagctgctggatgccgtgtacaagggcgtcccctactctcag
aggcccaaggccggggacatggacctggagtggcgccagggtcgcatggcccgcatcatc
ctgcaggacgaggacgtcaccaccaagatagataatgactggaagaggctcaacacactg
gcccactaccaggtgactgacgggtcctcggtggccttagtgcccaagcagacgtccgcc
tacaacatctccaactcgtccaccttcaccaagtccctcagcagatacgagagcatgctc
cgcacggccagcagcccggacagcctgcgctcccgcacgcccatgatcacgcccgacctg
gagagtggcaccaagttgtggcacctggtcaagaaccacgaccacctggaccagcgtgag
ggcgaccgtggcagcaagatggtctcagagatctacctgactcggctgctggccaccaag
ggcacgctgcagaagttcgtggacgacctcttcgagaccatcttcagcactgcacaccgg
ggctctgccctgccgctggccatcaaatacatgttcgacttcctggacgagcaggctgac
cagcaccagatacacgacgcagatgtgcgccacacctggaagagcaactgcctgcccctg
cgcttttgggtgaacgtgatcaagaacccgcagtttgtgttcgacatccacaagagcagc
atcacagacgcctgcctgtcagtggtggcccagaccttcatggactcctgctccacatca
gagcacaagctgggcaaggactcgccctccaacaaattgctctacgccaaggacatcccc
aattacaagagctgggtggagaggtactatgctgacattgccaagatgcctgccatcagc
gaccaggacatgagtgcgtacctggccgagcagtcacggctacacctgagccagttcaac
agcatgagtgccctgcacgagatctactcttacatcagcaagtacaaagatgagatcctg
acggccctggagaaggatgaacaggcccggcggcagcggctccggagcaagttggagcag
gtggtggacaccatggccttgagcagctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (39)   

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