KEGG   Sus scrofa (pig): 100626621
Entry
100626621         CDS       T01009                                 
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41 isoform X1
  KO
K12017  tripartite motif-containing protein 41 [EC:2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100626621 (TRIM41)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100626621 (TRIM41)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100626621 (TRIM41)
SSDB
Motif
Pfam: PRY SPRY zf-C3HC4_4 zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 Apolipoprotein DUF3631 zf-RING_5 zf-RING_6 DUF1664
Other DBs
NCBI-GeneID: 100626621
NCBI-ProteinID: XP_020939058
Position
2:complement(57285401..57295771)
AA seq 629 aa
MAAVAMAPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD
REEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMGGSNWDNM
DYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCF
TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPNPGRGSRGNEQGICPKHQEALKLFCEVD
EEAICVVCRESRNHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE
LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS
RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKM
SRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHSKRFSADCCVLGAQGF
RSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVGSGDASSSRHHHRRRRLHLPQ
QPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFYNAETLAHV
HTFSAAFLGERVFPFFRVLSKGTRIKLCP
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggctgccgttgccatggcacccaaccctgtgcagacccttcaggaggaggcggtgtgc
gccatctgcctggattacttcacggaccccgtgtccatcggctgcgggcacaacttctgc
cgagtgtgtgtaacccagttgtggggaggggaggatgaagaggacagggacgagttagac
cgggaagaagaggaggaggacggcgaggaggaggaagtggaggctgtgggggccggtggt
gggtgggacacccccatgcgggatgaagactatgagggcgacatggaagaggaggttgag
gaggaagaggagggtgtgttctggaccagtggcatgggcgggtcgaactgggacaacatg
gactacgtgtgggaggaggaggacgaggaggaagacctggactattacttgggggacatg
gaggaggacctgaggggggaggatgaggaggacgaggaggaagtgctggaggaggacgaa
gaagaggaactagatcccgtcaccccactgcccccgcctccagcccctcggaggtgcttc
acctgcccccagtgccgcaagagctttcctaggcggagcttccgccccaacctgcagctg
gccaacatggtccaggtgattcggcagatgcacccaaaccctggtcgagggagccgtggg
aacgagcagggcatttgtcccaaacaccaagaagccctgaagctcttctgcgaggtggat
gaagaggccatctgtgtggtgtgccgagaatccaggaaccacaaacagcacagcgtggtg
ccattggaggaggtggtacaggagtacaaggccaagctgcaggggcatgtggaaccactg
aggaagcacctggaggctgtgcagaagatgaaggcgaaggaggagagacgggtgacagag
ctgaagagccagatgaagtcagagctggcagctgtggcctcagaattcgggcggctgaca
cggtttctggcggaagagcaggcagggctagagcggcgcctccgagagatgcatgaagct
cagctggggcgtgcgggagcagcggccagccgcctagcggagcaggccgcccagctgagc
cgcctgctggctgaagcccaggagcggagccagcaggggggcctacggctgctccaggac
atcaaggagactttcaataggtgtgaagaggtacagctgcagcccccagaggtctggtcc
cctgacccgtgtcaaccccatagccatgacttcctgacagacgccatcgtgaggaaaatg
agccggatgttctgtcaggctgcccgagtggacctgacgttggaccctgacacggctcac
ccggccctgatgctgtcccctgaccgccggggggtccgtctggcagagcggcggcaggag
gttgctgaccattccaagcgcttctcggccgactgctgcgtactgggggcccagggcttc
cgctctggccggcactactgggaggtagaggtgggtgggcggaggggctgggcggtgggc
gctgcccgtgaatcaacccatcataaagagaaggtgggctccggggggtcctctgtgggc
agtggggatgccagctcctcacgccatcatcatcgccgccggcggctccacctgccccag
caacccctgctccagcgggaagtgtggtgtgtgggcaccaatggcaaacgctaccaggca
cagagctcgacggagcagacactgctgagcccaagtgagaaacctcggcgctttggcgtg
tacctggactatgaggctgggcgcctgggcttctacaatgcggagactctggctcatgtg
cataccttttcggctgccttcctgggcgagcgtgtcttccctttcttccgggtgctctct
aagggcacccgcatcaagctctgcccttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (14)   
   Pfam (14)   
All databases (45)   

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