KEGG   Sus scrofa (pig): 100738170
Entry
100738170         CDS       T01009                                 
Symbol
TRIM68
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM68
  KO
K12033  tripartite motif-containing protein 68 [EC:2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100738170 (TRIM68)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100738170 (TRIM68)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100738170 (TRIM68)
SSDB
Motif
Pfam: SPRY PRY zf-C3HC4_4 zf-C3HC4 zf-B_box zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-RING_6 Sina_RING TRAF3_RING zf-Nse Trm112p zf-RING_10
Other DBs
NCBI-GeneID: 100738170
NCBI-ProteinID: XP_003482598
Ensembl: ENSSSCG00000014768
Position
9:5502931..5516936
AA seq 485 aa
MDPAALMEAVVEEVACPICMTFLKEPVSIDCGHSFCHSCLSGLWEVPGEAPNWGYSCPLC
RAPVQPRNLRPNWQLANVAEKIRRLGLHPGMGLKGDVCEPHGQQLRMFCQEDGLLMCEAC
SRAPEHEAHRVLPMEDVAWDYKWKLHEALEHLRKEHEEAWKLEVGERKRTANWKIQVETR
KQSIMWEFEKYRRLLKKKQPPGRRLEVEAAAALASLEQEEGETARKLELNHDALIQQSRV
LWRMIAELEDRSQRPVRWMLQGIQDVLNRSQSWRLQRPEPVSLELKTDCRVPGLREILKT
FAADVRLDPDTAYSRLIVSEDRKCVRYGDTKQKLPDNPXRFYRYNIVLGSQCISSGRHYW
EVEVGDRSEWGLGVCRESVDRKEVVYLSPHYGFWVIRLRKGSEYRAGTDEYPLLSLPVPP
RRVGVFLDYEAHDISFYNVTDNGAHIFTFPHYPFPGRLLPYFSPCYSIGANNTAPLTICS
LDGED
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggatcccgcagcgttgatggaagccgttgtggaagaagtggcctgtcccatctgcatg
accttcctgaaggagcccgtgagcatcgactgtggccacagcttctgccacagctgtctc
tccggcctctgggaggtgccaggggaagcccccaactggggttactcctgtcccctctgc
cgggcccccgtccagccaaggaacctgcggcctaattggcagctggccaacgtcgcagag
aagatccgacggctagggctgcaccccggaatggggctgaagggcgacgtgtgtgagccc
cacgggcagcagctgaggatgttctgccaagaggatggcctgctcatgtgcgaggcctgc
agccgggcccccgagcacgaggcccaccgggtcctgcccatggaggatgtcgcctgggat
tataagtggaaactgcacgaggccctggagcatctgaggaaagagcacgaagaggcctgg
aagctggaagtgggtgagaggaagcgaactgccaactggaagatacaggtggaaacccga
aagcagagcatcatgtgggagtttgagaaataccggcggttactaaagaaaaagcagcca
ccaggtcggcggctggaggtcgaggcggccgcagctctggccagcctggagcaggaggaa
ggggagacggcgcgcaaactggagttgaatcacgacgcgctcatccagcagagccgggtc
ctgtggcggatgatcgcggagctggaggacaggtctcagaggcccgtccgctggatgctg
cagggcatccaggacgtcttaaacaggagccagtcctggaggttgcagcgacccgaaccc
gtctcgctggagctgaagacagactgccgagtgccggggctgcgagagatcctgaagacg
tttgcagcggacgtgcgcctggatccggacacggcttattctcgcctcatcgtgtctgag
gacagaaaatgcgtgcgctacggagacaccaagcagaaactgcccgacaatccgnagcgg
ttttaccgctacaacatcgtgctgggcagccagtgcatctcctcgggccggcactactgg
gaggtggaggtgggagacaggtccgagtggggcctgggggtgtgcagggagagcgtcgac
cggaaggaggtggtctacttgtccccccactacggcttctgggtgatcaggctgcggaag
ggcagtgagtaccgggcgggcaccgacgagtacccgctcctgtcgctgcctgtgccgccc
cgccgggtgggggtcttcctggattacgaggcccacgacatctccttctacaacgtgacc
gacaacggcgcccacattttcactttcccccactaccccttccctgggcgcctcctgccc
tatttcagtccttgctacagcatcggggccaacaacaccgctcccctgaccatctgctcc
ctggacggggaggactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (16)   
   Pfam (16)   
All databases (47)   

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