KEGG   Sus scrofa (pig): 397231
Entry
397231            CDS       T01009                                 
Symbol
CD40LG
Name
(RefSeq) CD40 ligand
  KO
K03161  tumor necrosis factor ligand superfamily member 5
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04060  Cytokine-cytokine receptor interaction
ssc04064  NF-kappa B signaling pathway
ssc04514  Cell adhesion molecules
ssc04660  T cell receptor signaling pathway
ssc04672  Intestinal immune network for IgA production
ssc05144  Malaria
ssc05145  Toxoplasmosis
ssc05310  Asthma
ssc05320  Autoimmune thyroid disease
ssc05322  Systemic lupus erythematosus
ssc05330  Allograft rejection
ssc05340  Primary immunodeficiency
ssc05416  Viral myocarditis
ssc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    397231 (CD40LG)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    397231 (CD40LG)
   04514 Cell adhesion molecules
    397231 (CD40LG)
 09150 Organismal Systems
  09151 Immune system
   04660 T cell receptor signaling pathway
    397231 (CD40LG)
   04672 Intestinal immune network for IgA production
    397231 (CD40LG)
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05144 Malaria
    397231 (CD40LG)
   05145 Toxoplasmosis
    397231 (CD40LG)
  09163 Immune disease
   05310 Asthma
    397231 (CD40LG)
   05322 Systemic lupus erythematosus
    397231 (CD40LG)
   05320 Autoimmune thyroid disease
    397231 (CD40LG)
   05330 Allograft rejection
    397231 (CD40LG)
   05340 Primary immunodeficiency
    397231 (CD40LG)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    397231 (CD40LG)
   05416 Viral myocarditis
    397231 (CD40LG)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ssc04052]
    397231 (CD40LG)
   04090 CD molecules [BR:ssc04090]
    397231 (CD40LG)
Cytokines and neuropeptides [BR:ssc04052]
 Cytokines
  Tumor necrosis fators
   397231 (CD40LG)
CD molecules [BR:ssc04090]
 Proteins
  397231 (CD40LG)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 397231
NCBI-ProteinID: NP_999291
Ensembl: ENSSSCG00000030172
UniProt: Q95MQ5 E1AXT9
Position
X:111778666..111788901
AA seq 261 aa
MIETYSQPSPRSVAAGPPVSMKIFMYLLTVFLITQMIGSALFAAYLHRRLDKIEDERNLH
EDFVFIKTIQRCKQGEGSLSLLNCEEIRSQFEDLVKGIMQSKEVKKKEKSFEMHKGDQDP
QIAAHVISEASSKTASVLQWAPKGYYTLSTNLVTLENGRQLAVKRQGIYYIYAQVTFCSN
RDAAGQAPFIASLCLRSPSGSERILLRAANTHSSSKPCGQQSIHLGGVFELQPGASVFVN
VTDPSQVSHGTGFTSFGLLKL
NT seq 786 nt   +upstreamnt  +downstreamnt
atgatcgaaacgtacagccaaccttcgccccgctctgtggccgctggaccacccgtcagt
atgaaaatctttatgtatttacttactgtttttcttatcacccagatgattgggtcagca
ctttttgcagcgtaccttcacagaagattggacaagatagaagatgaaaggaatcttcat
gaagattttgtgttcataaaaacgatacagagatgcaagcaaggagaggggtccttatcc
ttattgaactgtgaggaaatcagaagccagtttgaagacctggtcaagggtataatgcaa
agcaaagaagtgaagaagaaagaaaaaagctttgaaatgcacaaaggcgatcaggatcct
caaattgcggcacatgtcataagcgaggccagtagtaaaacagcatctgtcctgcagtgg
gcccccaaagggtactacaccctcagcaccaacttggtgaccctggaaaacgggagacag
ctggccgtcaaaagacaaggaatctattacatctacgcccaagtcaccttctgctccaac
cgggacgccgcgggtcaagctcccttcatagccagcctctgcctgaggtccccaagcggg
tcggagagaatcttactccgcgcggccaacacccacagttcctccaagccctgcgggcag
caatccattcacttgggcggagtcttcgagttgcaacccggcgcttcggtgttcgtcaac
gtgactgatccaagccaagtgagccacgggaccggcttcacgtcttttggcctcctcaaa
ctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (14)   
   KEGG PATHWAY (14)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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