KEGG   Sus scrofa (pig): 100049679
Entry
100049679         CDS       T01009                                 
Symbol
RABGGTA
Name
(RefSeq) geranylgeranyl transferase type-2 subunit alpha
  KO
K14050  geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ssc01006]
    100049679 (RABGGTA)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100049679 (RABGGTA)
Enzymes [BR:ssc01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     100049679 (RABGGTA)
Prenyltransferases [BR:ssc01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   100049679 (RABGGTA)
Membrane trafficking [BR:ssc04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100049679 (RABGGTA)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    100049679 (RABGGTA)
SSDB
Motif
Pfam: RabGGT_insert PPTA LRR_4 LRR_8 LRR_9 LRR_1
Other DBs
NCBI-GeneID: 100049679
NCBI-ProteinID: NP_001092063
Ensembl: ENSSSCG00000001992
UniProt: A5A779
Position
7:75021716..75028229
AA seq 567 aa
MHGRLKVKTSEEQAEAKRLEREQKLKLYQTATQTVFQKRQAGELDESVLELTSQILGANP
DFATLWNCRREVLQRLEVQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL
PEPNWARELELCARFLEVDERNFHCWDYRRFVASQAAVPPAEELAFTDSLITRNFSNYSS
WHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAD
PQDALRCLHVSRDEACLTVSFSRPLLVGPSTETLLLMVNESPLSVEWRTPDGRNRPSHVW
LCDLPAASLNDHLPQHTFRVIWTAGNAQKECVLLKGRQEGWCRDSATDEQLFRCELSVEK
STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFQTLKAVDPMRAA
YLDDLRSKFLLENSVLKMEYADVRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRLRALPP
ALAALRCLEVLQANDNAIESLDGVTNLPRLQELSLCNNRLQQPAVLQPLASCPRLVLLNL
QDNPLCQAVGISEHLAELLPSVSSILT
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgcacgggcgcctgaaggtgaagacatcagaagagcaagcagaagccaaaaggctagag
cgggaacagaagctgaagctataccagacagccacccagaccgtcttccagaagcgtcag
gctggagagctggatgagtcagtgctggaactgacaagccagattctgggagccaaccct
gactttgccacactctggaactgtcgacgggaggtgcttcagcggctggaggtccagaag
tccccggaagagttggccgctttggtgaaggcagaactgggcttcctggagagctgtctg
agggtgaaccccaagtcttatggtacctggcaccaccgctgctggttgctgggtcgcctg
ccagagcccaactgggcccgggagctggagttgtgtgcccgcttcctcgaggttgatgag
cggaactttcactgctgggactaccggcggtttgtggcctcccaggcagctgtccccccc
gcggaggagctagccttcacggacagcctcatcacccgaaacttctccaactactcctcc
tggcattaccgctcctgcctcttgccccagttgcacccccagccagactctggaccccag
gggcgcctccctgaggatgtgctgctcaaagagctggagctggtgcagaacgccttcttc
actgaccccaacgatcagagtgcctggttctaccatcgctggctcctgggacgagctgat
ccccaggatgccctgcgctgcctgcacgtgagccgggatgaggcctgtctgactgtctcc
ttctcccggcccctcctagtgggccccagcacggagaccttgctgctcatggttaatgag
tcacccctgtccgtggagtggaggaccccagatggcaggaaccggcctagccatgtctgg
ctctgtgacctgcctgccgcctccctcaacgaccatttgccgcaacatacgtttcgtgtc
atttggacagcaggcaatgcccagaaggagtgtgtgctcttaaaaggccgccaagagggc
tggtgccgagactcagccacagatgaacagctcttcaggtgtgagctgtcagtggagaag
tccacggtgctgcagtctgagctggaatcctgtaaggagctgcaggagctggagcctgag
aataaatggtgcctgctcaccatcatcttgctgatgcgggcgctggaccccctgctgtat
gagaaggagacgctgcagtacttccagaccctcaaggcagtggacccgatgcgggccgcg
tacctggatgacctgcgcagcaagttcctgctggagaacagcgtgctcaagatggagtac
gcggacgtgcgcgtgctgcatctgggtcacaaggatctgacggtgctctgccatctggaa
cagctgcttttggtcactcaccttgacctgtcacacaatcgtctccgagcgctaccgcca
gccctggctgccctgcgctgcctcgaggtgctgcaggccaatgataatgctatcgagtcc
ctggacggtgtcactaacctgccccggctgcaggagctctccctgtgcaacaaccgcctc
cagcagcctgcagtgctccagcctcttgcctcctgccccaggctggtcctcctcaacctg
caggacaaccccctgtgccaagcagtgggcatctcagagcacctggctgagctgctccct
tcagttagcagcatcctcacctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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