KEGG   Sus scrofa (pig): 100621140
Entry
100621140         CDS       T01009                                 
Symbol
YARS
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic isoform X1
  KO
K01866  tyrosyl-tRNA synthetase [EC:6.1.1.1]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100621140 (YARS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ssc01007]
    100621140 (YARS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ssc03016]
    100621140 (YARS)
   03029 Mitochondrial biogenesis [BR:ssc03029]
    100621140 (YARS)
Enzymes [BR:ssc01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.1  tyrosine---tRNA ligase
     100621140 (YARS)
Amino acid related enzymes [BR:ssc01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   100621140 (YARS)
Transfer RNA biogenesis [BR:ssc03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100621140 (YARS)
 Prokaryotic type
    100621140 (YARS)
Mitochondrial biogenesis [BR:ssc03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    100621140 (YARS)
SSDB
Motif
Pfam: tRNA-synt_1b tRNA_bind
Other DBs
NCBI-GeneID: 100621140
NCBI-ProteinID: XP_003356343
Ensembl: ENSSSCG00000029457
UniProt: I3L804 A0A8D0PIS1
Position
6:complement(89088122..89118837)
AA seq 528 aa
MGDALSPEEKLHLITRNLQEVLGEEKLKEILKERELKVYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEKLKFIKG
TDYQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
AQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKED
VKKKLKKAFCEPGNVDNNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYSDLEKDFA
DEVVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLSSAAYPDPSKQKPVAKGPAKNSEP
EEVIPSRLDIRVGRVISVDKHPDADSLYVEKVDVGEAEPRTVVSGLVQFVPKEDLQDRLV
VVLCNLKPQKMRGIESQGMLLCASVEGVSRKVEPLDPPAGSAPGERVFVKGYEKGQPDEE
LKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNIS
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgggagacgctctgagccctgaagagaagctgcaccttatcacccggaacctacaggag
gttcttggggaagaaaagctgaaggagatcctaaaggagcgggaacttaaagtttactgg
gggacggcaaccacaggcaagccccatgtggcttacttcgtgcctatgtccaaaatcgcg
gacttcctaaaagcaggatgtgaggtaacaattctatttgcggatcttcacgcatacctg
gataacatgaaagccccatgggaacttctagaactccgaaccagctactatgagaatgtg
atcaaggcgatgctagagagcattggggtgcccttggagaagctcaagttcatcaaaggc
actgattaccagctcagcaaagagtacacgctagatgtgtatcgcctctcctccgtggtc
actcagcacgacgccaagaaggctggagcggaggtggtcaagcaggtggagcaccccctg
ctgagcggcctgctgtacccagggctgcaggccttggatgaagaatatttgaaagtggat
gcccaatttggaggcgttgatcagagaaagattttcacctttgcagagaagtacctacct
gcgcttggctactcaaaacgggtccatctgatgaatcctatggttcccggattaactggc
agcaaaatgagctcttcagaagaggagtccaagattgatctccttgatcggaaagaggat
gtgaagaaaaaactgaagaaggccttctgtgagccagggaacgtggacaacaatggcgtc
ctgtccttcatcaagcatgtcctctttcccctcaagtctgagtttgtgatccttcgagat
gaaaaatggggtggaaacaaaacctacacagcttactcggacctggaaaaggactttgct
gatgaggttgtacaccctggagacctaaagaattctgttgaagtcgccttgaacaagttg
ctggatcccatccgggaaaagtttaatacccctgctctaaagaaactgtccagcgctgcc
tacccagatccctccaagcagaagccagtcgccaaaggccctgccaagaattcggaacca
gaggaggtcatcccgtcccggctggacatccgcgtggggagagtcattagtgtggacaag
cacccggatgcagacagcctgtatgtggagaaggttgacgtgggggaagctgagcctcgg
actgtggtgagcggcctggtgcagtttgtgcccaaggaggacctgcaggacaggctggtg
gtggtgctgtgcaatctgaaaccccagaagatgagaggaatcgagtcccaaggcatgctt
ctgtgtgcttctgtggaaggggtaagccgcaaggttgagcctctggaccctcctgcaggc
tcagctcctggggagcgagtgtttgtgaagggctatgagaagggccaaccagatgaggag
cttaagcccaagaagaaagtctttgagaagctgcaggctgactttaaaatttctgaggag
tgcatcgcacagtggaagcaaactaacttcatgaccaagctggggtccatctcctgtaaa
tcgctgaaaggagggaacatcagctag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (49)   

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