KEGG   Staphylococcus simulans: AL483_03670
Entry
AL483_03670       CDS       T04303                                 
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ssif  Staphylococcus simulans
Pathway
ssif03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AL483_03670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssif03400]
    AL483_03670
Enzymes [BR:ssif01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AL483_03670
DNA repair and recombination proteins [BR:ssif03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AL483_03670
    RecFOR pathway proteins
     AL483_03670
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase DUF815 AAA_22 AAA_16 AAA_18 AAA_3 RNA_helicase nSTAND3 AAA_14 NB-ARC TIP49 TsaE Sigma54_activ_2 AAA_28 Rad17 Bac_DnaA NTPase_1 AAA_17 ABC_tran Torsin
Other DBs
NCBI-ProteinID: AMG95937
Position
720023..721039
AA seq 338 aa
MDDRMVDQTVHDDEYSFELSLRPHLLRQYIGQASIKANLEVFIKAAKMREEPLDHVLLFG
PPGLGKTTLSNIIANEMGVNIRTVTGPAIERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
EEVLYPAMEDFYLDIVIGKGEEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
FYNEGELEDIIKRTAEVLGTEIDEESAAELAKRSRGTPRIANRLLKRVRDFQQVNEDDKI
YIETTKRALQLLQVDDYGLDYIDHKMMRCIINQYNGGPVGLDTIAVSIGEERITIEDVYE
PFLIQKGFLERTPRGRKATPLAYEHFGTEHGKRDNFEY
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggatgacagaatggtagatcaaacggtccatgatgatgaatattcttttgaattatca
ttgagaccacatttactaagacaatatatcggtcaagcatcaattaaagctaatttagaa
gtctttataaaagcagcaaagatgcgtgaggagccattagatcatgttttattattcggc
ccccctggacttggtaaaacaaccttgtcaaacatcattgcgaatgaaatgggtgtaaac
atcagaacagtcactggaccagcaatagaacgacctggtgatttagcagcaatcctttca
ggtttgcaaccaggtgatgttttgtttattgatgaaattcatcgtttaagcagtgtagtt
gaagaggttttatatcctgcaatggaagatttctatttagatatcgtgatcggcaaagga
gaagaagcgcgcagtattcgtattgatttgcctccatttacattagtaggtgcaacgaca
agagccggcagcttaacgggccctttacgtgatcgctttggtgttcatttacgtttggag
ttttataacgagggtgaactagaagatattattaagcgaactgcagaagtactaggtaca
gaaattgatgaagagagtgctgcagaacttgcgaaacgtagtagaggtacaccacgtatt
gccaaccgtcttcttaaacgcgttcgagatttccaacaagtcaatgaagacgacaaaata
tatattgaaacaacaaaacgtgcattacaacttctacaagtggatgattatggtttagat
tacatcgaccataaaatgatgcgctgtattattaatcaatataatgggggacctgtcggt
ttagacacaatcgctgtttctatcggtgaagaacgcattacaatcgaagatgtctatgag
cctttcttaattcaaaaaggctttttagaacgcacaccgagaggaagaaaagcgacaccc
ctagcttatgaacactttggcactgaacatggaaagagggacaattttgaatattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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