KEGG T02672: TL13

Streptococcus suis TL13 (serotype 16): TL13_0932

Entry

TL13_0932         CDS       T02672

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

ssut Streptococcus suis TL13 (serotype 16)

Brite

KEGG Orthology (KO) [BR:ssut00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssut03032]
    TL13_0932 (topA)
   03400 DNA repair and recombination proteins [BR:ssut03400]
    TL13_0932 (topA)
Enzymes [BR:ssut01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     TL13_0932 (topA)
DNA replication proteins [BR:ssut03032]
Prokaryotic type
  DNA Topoisomerases
   TL13_0932 (topA)
DNA repair and recombination proteins [BR:ssut03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      TL13_0932 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim DUF2996 Toprim_4 HypA

Other DBs

NCBI-ProteinID:

AGL47862

Position

945207..947300

AA seq 697 aa
MATKTVSKKKTTTKKNLVIVESPAKAKTIEKYLGKNYKVVASVGHIRDLKKSSMSIDFDN
NYAPEYINIRGKGPLINSLKKEAKNAKQVFLASDPDREGEAISWHLAHILGLDANDKNRV
VFNEITKDAVKNAFQEPRAINLDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQ
SVALKLIIDRENEISNFKPEEYWTIDATFKKGSKKFQASFYGIDGKRTKIENNEQVKEIL
ARLDGDDFLVEQVERKERKRNAPLPYTTSTMQMDAANKINFRTRKTMMVAQQLYEGVSLG
TGGTQGLITYMRTDSTRISPVAQAQAADFITERFGATYSKHGNKVKNASGAQDAHEAIRP
SNVNLTPESIAKYLDKDQLRLYTLIWNRFVASQMAAAVFDTMSVRLGQNGIVFAANGSQV
KFDGYMAVYNDADKNKMLPDMEQGDTVVRASTNPEQHFTQPPARYSEATLIKTLEENGVG
RPSTYAPTIETIQKRYYVKLAAKRFEPTELGEIVNKLIVEFFPDIVNVKFTADMEQKLDD
VEIGKEQWQKVIDGFYQPFKVELSKAEEQMEKIQIKDEPAGFDCDVCGHEMVIKLGRFGK
FYACSNFPDCRNTKQITKEIGVTCPVCQKGQVIERKSKRNRLFYGCDRYPECEFTSWDKP
VGRSCPKCDHYLVEKKVRGGGKQVVCPNGDYEEDKIK

NT seq 2094 nt +upstreamnt +downstreamnt
atggctacaaaaacagttagtaagaaaaaaacaacaaccaagaaaaatctcgttattgta
gagtctcctgctaaggcaaaaacaatcgaaaaatatcttggtaaaaattataaggtcgtt
gcttcagtcgggcatattcgagatttgaagaaatctagtatgtctattgactttgataac
aactatgcacctgagtacatcaacatacgtggaaaaggaccactcatcaattctttgaaa
aaagaagcaaaaaatgctaagcaagtctttctcgcgagtgacccggaccgcgaaggagaa
gcaatttcttggcatttggctcacattttgggattggacgcaaacgataaaaaccgtgtt
gtctttaatgaaattacaaaagatgcagtaaaaaatgcctttcaggagccacgtgctatt
aacctagacttggtagatgcccaacaagctcgacgcgtcttagaccgtattgtaggatac
tctatctcacctattttatggaagaaagtcaaaaaaggtctgtcagcaggacgtgttcaa
tcggttgctctcaaattaataatcgaccgtgaaaatgaaatcagcaatttcaaaccagaa
gaatattggacaattgatgcaaccttcaaaaaggggagcaagaaattccaggcttcattc
tatggtatagatggaaagagaactaaaattgaaaacaatgagcaggttaaagaaattctt
gcccgacttgatggagatgatttcttagtagaacaggttgagcgtaaggaacgcaaacga
aatgcacctctgccttacacaacttctaccatgcagatggatgcggctaataaaatcaat
ttccgtactcgtaaaaccatgatggttgcccaacaactttatgagggtgtcagtcttggc
acaggtggtacccaaggtttgatcacctatatgcgtacggattcaacacgtattagccct
gttgcacaagcacaagctgctgactttatcacggagcgttttggtgctacctattcaaag
catggtaacaaagtaaaaaatgccagtggtgcacaagatgcccacgaagccattcgtcca
tcaaatgttaacttaacacctgaatcaattgcaaaatatctggacaaggaccagttgcga
ctatatacactgatttggaatcgttttgtcgcaagtcagatggctgcagcagtttttgat
accatgagtgttcgtttgggtcaaaatggtattgtttttgctgctaatggtagccaagta
aaattcgatggttatatggctgtctataacgacgctgataaaaataaaatgttgccagat
atggaacaaggtgacacggtggtacgcgcgtcaacaaatccagaacaacactttactcag
ccaccagctcgctactctgaagcaaccttaattaaaacattagaagagaatggtgtaggt
cgcccgtcaacttatgcaccaacgattgaaaccattcaaaaacgttactatgttaagctt
gcggctaagcgatttgaaccaactgaactcggagaaatcgttaataagctgattgttgaa
tttttcccagatattgtcaatgtcaaatttacagccgatatggaacaaaaattggatgat
gtagaaatcgggaaagagcagtggcagaaggtcattgacggtttctatcagccattcaag
gtagaattatctaaggcagaagaacagatggaaaaaatccaaattaaggatgaaccagct
ggctttgactgtgatgtttgtggacatgaaatggttattaaattaggacgttttggaaaa
ttctatgcatgtagcaatttcccagattgtcgcaataccaagcaaatcactaaagaaatt
ggtgtgacttgtcctgtctgccaaaaagggcaagtgattgaacgcaagagtaaacgcaat
cgtcttttctatggttgtgatcgctacccagagtgtgaatttacttcttgggacaagcca
gtcggacgttcttgtccgaaatgcgaccactatctcgttgagaaaaaagttcgtggtgga
gggaaacaagttgtctgtccaaatggtgactacgaagaagacaagattaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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