KEGG   Streptomyces sp. SirexAA-E: SACTE_1373
Entry
SACTE_1373        CDS       T01601                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
ssx  Streptomyces sp. SirexAA-E
Pathway
ssx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SACTE_1373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssx03400]
    SACTE_1373
DNA repair and recombination proteins [BR:ssx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SACTE_1373
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 HHH_2 UVR HHH GIY_YIG_2 GIY_YIG_domain MciZ UPF0758_N
Other DBs
NCBI-ProteinID: AEN09291
UniProt: G2NH37
Position
complement(1532608..1534701)
AA seq 697 aa
MADPSSYRPKPGQIPDSPGVYKFRDEHRRVIYVGKAKNLRQRLANYFQDLAGLHPRTRTM
VTTAASVEWTVVSTEVEALQLEYSWIKEFDPRFNVKYRDDKSYPYLAVTLNEEFPRVQVM
RGAKKKGVRYFGPYGHAWAIRETVDLMLRVFPVRTCSAGVFKNAERTGRPCLLGYIGKCS
APCVGRVTPQEHRDLAEDFCDFMAGRTGTYIRRLEKDMTRAAEEMEYERAARLRDDAEAL
KRAMEKSAVVLADATDADLIAVAEDELEAAVQIFHVRGGRVRGQRGWVTDKVEAVDTAGL
VEHALQQLYGEESGDAVPKEVLVPALPEDTEAVSQWLAGRRGSHVSLRIPQRGDKKDLMV
TVQRNAQQALGLHKTKRASDLTTRSRALEEIAEALGLDTAPLRVECFDISHLQGDDVVAS
MVVFEDGLARKSEYRRFQIKGFEGQDDVRSMHEVIGRRFKRHLQEKERTGEWEGASAASG
PVPGPAPSGPVPAPAAAFPGSVPAGPQDAPQDAPQDGSREEDGRPRRFAYPPQLVVVDGG
QPQVAAAKRALDELGIDDIAVCGLAKRLEEVWLPDDDDPVVLPRSSEGLYLLQRIRDEAH
RFAITYQRAKRAKRIRSSPLDDIAGLGETRKQALIKHFGSVKRLRQATIEEICEVPGIGR
RTAESVAVALAGAAPPAPAVNTATGEIIEEDDGGSTS
NT seq 2094 nt   +upstreamnt  +downstreamnt
atggcagacccctccagctaccgccccaagccgggacagatccccgactccccgggggtc
tacaagttccgcgacgagcaccgccgggtgatctacgtcgggaaggccaagaacctgcgc
cagcgcctggccaactacttccaggacctggccggcctgcacccgcgtacccgcaccatg
gtcaccacggcggcctccgtcgagtggaccgtcgtctccaccgaggtcgaggcgctccag
ctggagtactcctggatcaaggagttcgacccccgtttcaacgtcaagtaccgcgacgac
aagagctacccctacctcgcggtcacgctgaacgaggagttcccgcgcgtccaggtcatg
cgcggcgccaagaagaagggcgtccgctacttcggcccgtacggccacgcctgggccatc
cgcgagacggtggacctgatgctccgggtcttccccgtgcgcacctgctccgccggcgtc
ttcaagaacgccgagcgcaccggccggccctgtctcctgggctacatcggcaagtgctcg
gccccgtgcgtcgggcgggtcaccccccaggagcaccgcgacctggccgaggacttctgc
gacttcatggccggccgcacgggcacctacatccgccgcctggagaaggacatgacgcgg
gcggccgaggagatggagtacgagcgggcggcccggctgcgggacgacgccgaggcgctc
aagcgcgccatggagaagagcgccgtcgtcctcgcggacgccaccgacgccgacctgatc
gccgtcgccgaggacgagctcgaagcggccgtccagatcttccacgtccgcggcggacgg
gtgcgcggccagcgcggctgggtcacggacaaggtcgaggccgtcgacacggcgggcctc
gtcgaacacgcgctccagcagctgtacggggaggagtccggcgacgcggtgcccaaggag
gtcctcgtcccggccctgcccgaggacaccgaagccgtctcccagtggctcgcaggccgc
cgcggctcccatgtgagcctgcgcatcccgcagcgcggcgacaagaaggacctgatggtc
acggtccagcgcaacgcccagcaggccctggggctgcacaagaccaagcgggcgtccgac
ctcacgacccgctcccgcgcgctggaggagatcgccgaggccctcgggctggacaccgcg
ccgctgcgcgtcgagtgcttcgacatctcgcatctccagggggacgacgtcgtcgcgtcc
atggtggtcttcgaggacggcctggcacgcaagagcgagtaccgccgcttccagatcaag
ggcttcgagggccaggacgacgtgcggtcgatgcacgaggtcatcggccgccgcttcaag
cgccacctccaggagaaggagcgcacgggggagtgggagggggcctcggcggcctccggg
cccgtacccggcccggcgcccagcggtcccgtgccggccccggcggccgcgttccccggg
agcgtgcccgccggtccgcaggacgccccgcaggacgccccgcaggacggctcccgtgag
gaggacggccgccccaggcgcttcgcctatccgccgcagctcgtggtcgtcgacggagga
cagccgcaggtggccgccgccaagcgtgccctggacgagctgggcatcgacgacatcgcc
gtgtgcggcctcgccaagcgcctggaggaggtctggctgccggacgacgacgaccccgtc
gtcctgccccgctccagcgagggcctgtacctcctccagcgcatccgcgacgaggcccac
cgcttcgccatcacctaccagcgcgccaagcgggccaagcgcatccgcagcagccccctg
gacgacatcgcggggctcggcgagacccgcaaacaagcgctgatcaagcacttcggttcc
gtgaagaggctgcggcaggcgacaatcgaagagatctgcgaggtgcccggcataggccgc
cggacggcggaatccgtggccgtcgccctcgccggggccgcaccgcccgcaccggccgtc
aacacggccacaggagagatcatcgaagaggacgacgggggcagcacgtcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system