KEGG   Streptomyces sp. SirexAA-E: SACTE_4414
Entry
SACTE_4414        CDS       T01601                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ssx  Streptomyces sp. SirexAA-E
Pathway
ssx03420  Nucleotide excision repair
ssx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ssx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SACTE_4414
   03430 Mismatch repair
    SACTE_4414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssx03400]
    SACTE_4414
Enzymes [BR:ssx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SACTE_4414
DNA repair and recombination proteins [BR:ssx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SACTE_4414
   MMR (mismatch excision repair)
    Other MMR factors
     SACTE_4414
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: AEN12247
UniProt: G2NIX4
Position
4878150..4881644
AA seq 1164 aa
MPPVSLCGVSSRLTDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARV
VWLVGTGQVAPEQVLGLTFTNKAAGELAERVRKALVAAGVTDPDVIDPDNPPGEPSISTY
HAFAGRLLTEHGLRIGLEPTTRLLADATRYQLAARVLREAPGPYPALTRSFPTLVSDLLA
LDAELAEHLVRPDELARHDTELLGTLAGAKLTNADLRKVPETVEARRELLGLTRRYREAK
RSRDLLDFGDQIALSAELALTRPEVGTLLRDEFRVVLLDEYQDTSVAQRLLLSALFGSGP
GGDTGHAVTAVGDPCQAIYGWRGASVANLDDFPQHFPHADGTPATRYSLSENRRSGGRLL
HLANGLADPLRAMHEGVEALRPAPGAERDGTVRCALLRTHAEEIDWLGDSLAHLVRTGTP
PGEIAVLCRTAGDFPRIQAALVDRDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANAS
LVRLLTGPRWRIGPRDLALLGRRARLLVHHASPDDDTDPDRRLAEAVEGVDPAEVISLAD
ALDTFLDSGGHQDDQLPFSAEARIRYARLATELRELRRSLADPLMDVLHRVLSTTGLEVE
LSASPHALAARRRETLANFLDVAAGFAAVDGEATLLAFLGFLRTAAQYEKGLDNALPGGE
NTVKVLTAHKSKGLEWDVVAVPGLVTGQFPSTRSREAWTAQSKVLPHALRGDAATLPDVC
SWDAKGLKAFKDEMTAHQHTEELRLGYVTFTRPRRLLLGSGHWWGPSQKKPRGPSAFLDA
LYDHCAAGHGEIEVWADEPGPDEENPVLREREAEQAWPLPLDETALARRRAARDTVLAHL
DALAAAPDPEAEAEAQAGPPEHGEPLYDEEFPYDAEEPPYDEDPPYDEEPPYDEEPPGEQ
LFPDGGPIRADRAPGRVPHLPAARVPSDPPDLTPEEARTLASWDRDLDALAGELRRARAT
VHDVVVPASLSATQLLHLADDPDGFARELARPMPRPPQPAARRGTRFHAWVESRFEELPL
PMLGPDELPGGDDGDAEIADERDLAELKEAFERTEYARRTPYRVETPFQIVLAGRVIRGR
IDAVYRTGDTYEIVDWKTARHRTADPLQLAVYRLAWAELHGLAPEAVGATFLYVRTGETV
RPTGLPGRAELERLLLDEPPPRGR
NT seq 3495 nt   +upstreamnt  +downstreamnt
gtgccgccggttagcctctgtggagtgtcctcccgcctcaccgacccggagcagctcaag
gagctcctcgggatccccttcaccccggagcagacggcctgcatcaccgcgccgcccgcc
ccgcaggtgatcgtggccggagccggctccggcaagacgacggtgatggccgcccgggtg
gtgtggctggtcggcaccggccaggtcgccccggagcaggtcctgggcctcaccttcacc
aacaaggcggccggggagctggccgaacgggtccgcaaggccctcgtcgcggccggggtc
accgacccggatgtcatcgacccggacaacccccccggtgaacccagcatctccacctac
cacgccttcgccggacggctgctgaccgagcacggcctgcggatcgggctcgaacccacc
acccgcctcctcgccgacgccacccgctatcagctcgccgcccgggtactgcgcgaggcc
cccggcccgtaccccgccctgaccaggtccttccccaccctcgtcagcgacctgctggcc
ctggacgccgagctcgccgaacacctcgtacgccccgacgagctcgcccgccacgacacc
gagctgctcggaacactcgccggggccaagctcaccaacgcggacctgcgcaaggtcccc
gagaccgtcgaggcccgccgtgaactgctcgggctgacccggcgctaccgcgaggccaag
cgcagccgggacctgctcgacttcggtgaccagatcgccctctccgccgagctggccctc
acccgccccgaggtcggcaccctcctgcgcgacgagttccgggtcgtcctgctcgacgag
taccaggacacctccgtggcccagcgcctcctgctctcggcgctcttcggcagcggcccc
gggggagacacaggacacgccgtcaccgccgtcggcgacccgtgccaggcgatctacggc
tggcgcggtgcctccgtcgccaacctcgacgacttcccccagcacttcccgcacgccgac
ggcacccccgcgacgcgctactccctcagcgagaaccggcgcagcggaggtcgcctcctc
cacctcgccaacggtctcgccgaccccctgcgcgccatgcacgagggcgtcgaggccctg
cggccggcaccgggagccgagcgcgacggcaccgtccggtgcgccctgctgcgcacgcac
gccgaggagatcgactggctcggcgactccctcgcccacctcgtccggaccggcacgccc
cccggggagatcgccgtgctgtgccggaccgccggcgacttcccccgcatccaggccgcc
ctcgtcgaccgggacgtcccggtcgaggtcgtcggcctgtccggcctgctgcacctcccg
gaggtcgccgacctcgtcgccgtctgcgaggtcctccaggacccgggggccaacgcctcc
ctggtccggctgctcaccggtccgcgctggcggatcggcccccgggacctcgccctcctg
ggacgccgcgcccgtctcctggtgcaccacgcctcgcccgacgacgacaccgacccggac
cgccggctggcggaggccgtcgagggcgtcgaccccgccgaggtcatctccctcgcggac
gcccttgacaccttcctggactccggcggccaccaggacgaccagcttccgttctcggcc
gaggcccgcatccggtacgcccggctcgccaccgagctgcgcgagctgcgccggtcactg
gccgacccgctcatggacgtactgcaccgggtcctctccaccaccggcctggaggtcgag
ctgtcggcctcgccgcacgccctggccgcccggcgccgcgagaccctcgccaacttcctg
gacgtcgcggccggcttcgcggcggtcgacggggaggccaccctgctggccttcctcggc
ttcctgcgaacggccgcccagtacgagaagggtctggacaacgcactgcccggcggcgag
aacaccgtcaaggtcctcaccgcccacaagtccaagggcctggaatgggacgtcgtcgcc
gtacccgggctcgtcaccggccagttccccagcacccggtcccgggaggcatggacagcg
cagtccaaggtcctgccgcacgcactgcgcggcgacgcggccaccctcccggacgtctgc
tcctgggacgccaagggactcaaggcgttcaaggacgagatgacggcgcaccagcacacc
gaggagctgcgcctggggtacgtcaccttcacgcgtccgcgcaggctgctcctcggttcc
gggcactggtggggtccgtcccagaagaagccgcgcggtccgtccgccttcctggacgcg
ctgtacgaccactgcgcggccggccacggtgagatcgaggtctgggccgacgagccaggg
ccggacgaggagaatcccgtactccgggagcgggaggcggaacaggcctggcccctgccg
ctggacgagaccgcactggcccgccgccgcgccgccagggacaccgtgctggcccacctg
gacgccttggccgcggctcccgacccggaggcggaggcggaggcacaggccgggcccccg
gaacacggggagcccctgtacgacgaagagtttccgtacgacgccgaggagcccccgtac
gacgaagatccgccgtacgacgaggaaccgccgtacgacgaggaaccccccggcgagcag
ctgttcccggacggggggcccatccgagcggaccgcgcccccggccgggtaccgcacctt
cccgccgcccgggtgccctccgatcctccggacctcaccccggaggaggcccggaccctc
gcctcctgggaccgcgacctcgacgccctggcgggtgagctgcgccgggcccgcgcgacc
gtccacgacgtcgtggtgcccgcctcgctctccgccacccagctgctgcacctcgccgac
gaccccgacggcttcgcacgcgagctggcccgccccatgcccaggccgccgcagcccgcc
gcccgccgggggacccggttccacgcctgggtggaatcccggttcgaggagctcccgctg
cccatgctcggccccgacgagctccccggaggcgacgacggcgacgcggagatcgccgac
gaacgggacctcgccgagctcaaggaggccttcgagcgcacggagtacgcccgccgcacc
ccgtaccgcgtcgagacccccttccagatcgtcctggcgggcagggtgatccggggacgg
atcgacgcggtgtaccgcacgggtgacacctacgagatcgtggactggaagacggcccgg
caccgcaccgccgacccgctccagctcgccgtctaccgcctggcctgggccgaactgcac
ggactggccccggaagcggtcggcgcgaccttcctctacgtccgcaccggcgagaccgtc
cgccccacggggctgccgggcagggcggagctggaacgcctgctgctggacgagccacct
ccgcggggccgatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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