KEGG   Spirochaeta thermophila DSM 6192: STHERM_c07940
Entry
STHERM_c07940     CDS       T01315                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sta  Spirochaeta thermophila DSM 6192
Pathway
sta03420  Nucleotide excision repair
sta03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    STHERM_c07940
   03430 Mismatch repair
    STHERM_c07940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sta03400]
    STHERM_c07940
Enzymes [BR:sta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     STHERM_c07940
DNA repair and recombination proteins [BR:sta03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     STHERM_c07940
   MMR (mismatch excision repair)
    Other MMR factors
     STHERM_c07940
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 AAA_11 ResIII DEAD Dehalogenase
Other DBs
NCBI-ProteinID: ADN01744
UniProt: E0RRV7
Position
complement(873265..875262)
AA seq 665 aa
MRIDYRAELNPAQYEAVTTIDGPLLIIAGAGSGKTRVITYRIAYMLDSHIPQKAILALTF
TNKAAREMWERVRTLTGKKLTNLTVGTFHSFGAQILREHIHLLGYRPTFSIYDTQDQKAL
IKQCIQEVGLNPDLANISAIRTLISAIKTGRAGWNAENEVYRPVYEEYHAHLRAYHAVDF
DDLIVLPIGLFETHPEVLASYRERFRYILIDEFQDTSILQYRFIKLLAEEHRNLCVVGDD
DQSIYSWRGANYENFALFERDFPERKEVKLEQNYRSVQTILEAANQLISHNTNRKEKRLW
SGRPGKTSIYLTFPSNEREEAEYIAETIRTVVLKEGIPYHEIGVLVRTNSLMAPIEDAFL
RHNIPYKLSGGTSFFERKEIKDIIAYLRVILNPDDDVSLLRIINTPRRGIGRQTLHILGE
YATEHELSIYSALTSLLYAQGLPPQVARTFDEFVSLIEEFGERITGRTSIAETVRDLVDR
IDYFEYLMQEHRDNEKVARYRYQNLMLFSDLIERWENDPDNLNPNLGAYLTRISLITKDE
LDEEDTKGKVNLMTIHAAKGLEFAHVFLAGVEEGIIPHARALEDSETNIEEERRLFYVAI
TRAREALYLTSCRQRRVMREDQEQTPSPFLEELPDHLIETEAPPSDLTEEDVEDIFARMK
SRFGS
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgaggatcgactaccgcgcagagctcaacccagcccagtacgaggcagtcaccacgatc
gacggaccactgctcatcatcgcaggtgcgggatcgggcaagacccgcgtcatcacctac
cgcatcgcctacatgctcgactcccacatcccccagaaggccatcctcgccctcaccttc
accaacaaggccgcccgggagatgtgggagcgggtccgcaccctcacgggcaagaagctc
accaacctcacggtgggcaccttccacagcttcggggcccagatcctgcgcgaacacatc
cacctgctgggataccgtcccaccttcagcatctacgacacccaggaccagaaggccctc
atcaagcagtgcatccaggaggtgggactcaaccccgacctcgcgaacatctccgccatc
cgcaccctcatcagcgccataaagacgggaagggccgggtggaatgccgagaacgaggtc
tatcggcctgtgtacgaggaataccacgcccacctccgagcctaccatgcggtggacttc
gacgacctcatcgtcctccccatagggctcttcgagacccaccccgaggtcctcgcctcc
tacagggagcgcttccgctacatcctcatcgacgagttccaggacacctccatccttcag
tatcgcttcatcaagctcctcgccgaggagcaccgcaacctatgcgtggtgggagacgac
gaccagtccatctactcatggcgaggcgccaactacgagaacttcgccctctttgagcgg
gacttccccgagcggaaagaggtgaaactcgagcagaactatcgttccgtacaaaccatc
ctcgaggccgccaatcagctcatctcacacaacaccaacaggaaggagaagcgcctctgg
agcgggaggccgggcaagacatccatctacctcaccttcccctcgaacgagcgggaggag
gcggagtacatcgcggagaccatccgcaccgtggtcctcaaggaaggcatcccctatcac
gagataggggtcctcgtgcgcaccaacagcctcatggcccccatagaggacgccttcctc
aggcacaacatcccctacaagctctcgggcggtacgagcttcttcgaacgtaaagagata
aaggacatcatcgcctacctgcgggtcatcctcaacccggacgacgacgtgagcctcctg
cgcatcatcaacaccccgcggagggggataggccgtcagaccctccatatactcggcgag
tatgccacggagcacgagctctcgatctactccgccctcacctcgctcctctacgcgcaa
ggccttcccccccaggtggcacgcaccttcgacgagttcgtctcactcatcgaggaattc
ggggaacggatcaccggtcgcacctccatcgcagagaccgttcgggacctcgtggacagg
atcgactacttcgagtacctcatgcaggaacaccgcgacaacgagaaggtggcgcggtac
cggtaccagaacctcatgctcttctccgacctcatcgaacgctgggagaacgatcccgac
aacctcaaccccaacctcggcgcctacctcacccgcatcagcctcatcacgaaggacgaa
ctcgacgaggaggacacgaagggaaaggtgaacctcatgaccatccacgccgccaagggg
ctcgagttcgcccacgtcttcctcgcaggagtggaagaggggatcatccctcacgcccgg
gcactcgaggactccgagacgaacatagaggaggagcgcaggctcttctacgtcgccatc
acccgggcgagggaggccctgtacctcacctcctgcagacaacgacgcgtgatgagggag
gaccaggagcagactccttccccattcctcgaggagctccccgatcatctcatcgagacc
gaggcgcctccctccgatctcacggaagaggatgtggaagacatcttcgcccgcatgaag
tcgagattcggctcctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (40)   

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