KEGG   Stenotrophomonas sp. MYb57: CLM74_13860
Entry
CLM74_13860       CDS       T05384                                 
Name
(GenBank) multidrug efflux RND transporter permease subunit
  KO
K18138  multidrug efflux pump
Organism
stem  Stenotrophomonas sp. MYb57
Pathway
stem01501  beta-Lactam resistance
stem01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:stem00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    CLM74_13860
   01503 Cationic antimicrobial peptide (CAMP) resistance
    CLM74_13860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stem02000]
    CLM74_13860
   01504 Antimicrobial resistance genes [BR:stem01504]
    CLM74_13860
Transporters [BR:stem02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   CLM74_13860
Antimicrobial resistance genes [BR:stem01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    CLM74_13860
SSDB
Motif
Pfam: ACR_tran MMPL SecD_SecF
Other DBs
NCBI-ProteinID: AVJ33774
Position
3015475..3018648
AA seq 1057 aa
MPKFFIEHPVFAWVVAILISLSGVIAILNLGVESYPNIAPPQVTVSATYPGASADTTEKS
VTQVIEQQLTGIDHLLYFSSSSASNGRASITLTFETGTDPDIAQVQVQNKVSLATPRLPS
EVTQQGVVVAKANAGFLMVVALQSDTPTINRDALNDIVGSRVLDQVSRIPGVGSTQQFGS
EYAMNIWLNPEKMQGYGLSASQVLAAVRAQNVQFAAGALGSDPSPEGQHFTATVSAEGRF
SSPQEFENIILRANADGSRVLLKDIARVAFGANNYGFDTQYNGKPTGAFAIQLLPGANAL
NVAEAVRGKMDELQPSFPAGVTWFSPYDSTTFVKISIQEVVKTLFEAVLLVFLVMLIFLQ
NFRATLIPTLVIPVALLGTFLGMWMIGFTINQLTLFAMVLAIGIVVDDAIVVIENVERIM
TEEGLAPKPATQKAMTQITGAVVAITVVLAAVFIPSALQGGAAGEIYKQFALTIAISMAF
SAFLALGFTPALCATFLKPTHNDNPNIVYRTFNKYYDKISHTYVGHITSAVRHAPRWMIL
FVVLTALCGFLFTRMPGSFLPEEDQGYALAIVQLPPGSTKSQTNEAFAQMRGILEKQDGY
EGMLQVAGFSFVGSGENVGMGFIRLKPWEERKFTAPEFIQNMNGAFYGIKEAQIFVVNLP
TVQGLGQFGGFDMWLQDRSGAGYEQLTQARNILLGQAAQKPDHLVGVRPNGLENAPQLQL
HVDRVQAQSMGMSVSDVYSTIQLMLAPVYVNDFFYEGRIKRVTMQADGPYRTGQESLKSF
YSPSSLTTNADGTNAMIPLSTVVKSEWVSAPPSLSRYNGYSAINIVGSQAPGTSSGEAMQ
TMEGIVNDDLPAGFGYDWSGLSYQEILAGNAATLLLVLSIVVVFLCLAALYESWSIPVAV
LLVVPLGVLGALALSMMRGLPNDLFFKIGLITVIGLAAKNAILIVEFAVEQRAAGKTLRD
ATIEAARLRFRPILMTSFAFIMGVIPMAISTGAGANSRHAIGTGVIGGMLFATLLGLLMI
PVFFVVVRRMLGDKLDEPSKEFLGRQRDAESAHRPDR
NT seq 3174 nt   +upstreamnt  +downstreamnt
atgcctaaatttttcatcgaacatccagtcttcgcctgggtggtggcgatcctgatctcg
ctcagcggcgtgatcgcgatcctcaacctcggcgtggagtcctaccccaacatcgccccg
ccgcaggtgaccgtctcggccacctacccgggcgcaagtgcggataccacggagaaatcg
gtcacccaggtgatcgagcagcagctgaccggcatcgatcacctgctgtacttcagctcc
tcatcggcctccaacggccgcgcgtcgatcaccctgaccttcgagaccggtaccgatccg
gacatcgcccaggtgcaggtgcagaacaaggtctcgctggccacgccgcgactgccttcg
gaagtcacccagcagggtgtggtggtggccaaggccaacgccggcttcctgatggtggtg
gcgctgcagtccgatacgccgacgatcaaccgtgacgcactgaatgacatcgtcggttcg
cgcgtgctcgaccaggtctcgcgcatcccgggcgtcggcagcacccagcagttcggttcc
gagtacgccatgaacatctggctcaacccggaaaagatgcagggctatggcctgtcggcc
agccaggtgctggcggcggtacgcgcgcagaacgtgcagttcgccgccggtgcgctgggc
tccgacccgtcgccggaaggccagcacttcaccgccacggtgtcggccgaaggccgcttc
agctcgccgcaggagttcgagaacatcatcctgcgcgccaatgccgatggctcgcgcgtg
ctgttgaaggacatcgcccgcgtcgccttcggtgccaacaactacggcttcgatacccag
tacaacggcaagcccaccggcgccttcgccatccagctgctgccgggcgccaacgccctg
aacgtggccgaggcggtgcgcggcaagatggacgagctgcagcccagcttcccggccggc
gtcacctggttctcgccgtacgacagcaccaccttcgtcaagatctcgatccaggaagtg
gtcaagaccctgttcgaagcggtgttgctggtgttcctggtgatgctgatcttcctgcag
aacttccgcgccaccctgatcccgaccctggtcatcccggtggccctgctgggtacgttc
ctgggcatgtggatgatcggcttcacgatcaaccagctgaccctgtttgcgatggtgctg
gcgatcggcatcgtggtcgatgacgcgatcgtggtgatcgagaacgtcgaacgcatcatg
accgaggaaggcctggcgccgaagccggccacgcagaaggcgatgacccagatcaccggc
gcggtggtggccatcaccgtcgtgctggcggcggtgttcatcccctccgccctgcagggc
ggtgcggccggtgagatctacaagcagttcgccctgaccatcgccatctcgatggcgttc
tcggcgttcctggcgctgggcttcaccccggcactgtgcgcgacgttcctcaagccgacg
cacaacgacaacccgaacatcgtctaccgcaccttcaacaagtactacgacaagatcagc
cacacctatgtgggccacatcacctccgcggtgcgccatgcaccacgctggatgatcctg
ttcgtggtgctgaccgcgctgtgcggtttcctgttcacccgcatgccgggcagcttcctg
cctgaggaagaccagggctatgcactggcgatcgtgcagttgccgccgggctcgaccaag
agccagaccaacgaagcgttcgcacagatgcgcggcatcctggaaaagcaggatggctat
gaaggcatgctgcaggtggccggcttcagcttcgtcggttccggcgagaacgtgggcatg
ggcttcatccgcctgaagccgtgggaagagcgcaagttcactgctccggaattcatccag
aacatgaacggcgcgttctacggcatcaaggaagcgcagatcttcgtggtcaacctgccg
accgtgcagggccttggccagttcggcggctttgacatgtggctgcaggaccgcagcggc
gccggttatgagcagctgacccaggcccgcaacatcctgctcggccaggccgcgcagaag
ccggaccacctggtgggcgtgcgcccgaacggcctggaaaacgctccgcagctgcagctg
cacgtggaccgcgtgcaggcgcagtcgatgggcatgtcggtgtcggacgtgtacagcacc
atccagctgatgctggccccggtgtacgtcaacgacttcttctacgaaggccgcatcaag
cgcgtgaccatgcaggctgatggtccgtaccgcactggccaggaatcgctgaagagcttc
tacagcccgtccagcctgaccaccaatgccgatggcaccaacgcgatgattccgttgagc
acggtggtcaagtccgaatgggtctcggcaccgccgtcgctgagccgctacaacggctac
tcggcgatcaacatcgtcggctcgcaggcaccgggcaccagctcgggtgaagcgatgcag
accatggaaggcatcgtcaacgacgacctgccggcgggcttcggctacgactggtccggc
ctgtcctatcaggaaatcctggcaggcaacgccgcgacgctgctgctggtgctgtccatc
gtggtggtgttcctgtgcctggccgcgctgtatgaaagctggtcgatcccggtggcggtg
ctgctggtggtaccgcttggcgttctgggcgcactcgccctgtcgatgatgcgtggcctg
ccgaacgatctgttcttcaagatcggcctgatcacggtgatcggcctggccgcgaagaac
gcgatcctgatcgtggagttcgcggtggagcagcgtgcggcgggcaagaccctgcgcgat
gccaccatcgaagcggcgcgcctgcgattccgcccgatcctgatgacgtccttcgcgttc
atcatgggcgtcatcccgatggcgatctccaccggtgccggcgccaactcgcgccacgcc
atcggtaccggcgtgatcggcggcatgctgttcgccaccctgctcggcctgctgatgatc
ccggtgttcttcgtggtcgtgcgccgcatgctgggcgacaagctggatgaaccgtcgaag
gaattcctcggccgccagcgtgatgcggaaagcgcccaccgcccggatcgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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