KEGG   Streptococcus thermophilus ASCC 1275: T303_09700
Entry
T303_09700        CDS       T03360                                 
Name
(GenBank) mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sthe  Streptococcus thermophilus ASCC 1275
Pathway
sthe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sthe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    T303_09700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sthe03019]
    T303_09700
Messenger RNA biogenesis [BR:sthe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     T303_09700
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 SIS_2
Other DBs
NCBI-ProteinID: AIC25069
Position
1809446..1811128
AA seq 560 aa
MASKINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDY
SYIVENVDRVKALVVTHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDA
QLYEINADTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVGEPAD
LHRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFR
LQQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHASEILILC
TGSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIH
GKINNIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHADLAVDCGVPKENIFIME
NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSGDGVVLAVATVDFNS
KMILAGPDILSRGFIYMRESGDLIRDSQRILFNAIRIALKNKDASIQSVNGAIVNALRPF
LYEKTEREPIIIPMILTPDN
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggcatcaaaaatcaatctaaaacctgaagaagttggggtttatgcgattggtggtttg
ggagaaatcggtaaaaatacctatggtattgaataccaggatgaaatcatcatcgtcgat
gcgggtattaaattccctgaagatgatcttctcggtatcgattatgtcatcccggactat
tcttacatcgttgaaaacgttgaccgtgttaaggctcttgtcgttactcacggtcacgaa
gaccatattggtggtatccccttccttcttaaacaggcaaatatcccaatctatgcagga
ccacttgctcttgctcttatcaaaggaaaattggaagaacacggactactacgtgatgca
caactctatgaaattaacgctgatacagagcttactttcaaaaatatgagcgtaaccttc
ttccgcacaactcactcaattccagaacctctcggaattgtcatccatacaccacaaggt
aaaattgtttgtaccggtgactttaagttcgacctcactccagtaggtgagccagcagac
cttcatcgtatggctgcactcggtgaagaaggcgttctttgcctcctctcagactcaacc
aatgctgaagtcccaactttcactaattccgagaaggtcgttggacaatccatcatgaaa
ataattgaaggcattcacggacgtattatcttcgcctcatttgcctctaatattttccgt
cttcaacaagctgctgaggctgctgtaaaaaccggtcgtaagattgttgtctttggacgt
tctatggagaaagccattgttaatggtgttgaactaggctatatcaaagttccaaaagga
actattattgatcctagtgaaatgaaaaactatcatgccagtgagattcttatcttgtgt
accggttctcaaggggagcctatggcggcccttgcacgtattgccaatggtatgcaccga
caagtaacactacaacctggtgacaccgttatcttctcatctagccctatcccaggaaat
acaaccagcgttaaccgtttgattaataccattcaagaagcgggtgtagatgttattcac
ggtaaaatcaacaatatccatacctctggtcacggtggtcaacaagagcaaaaactaatg
cttcgcttgataaaaccaaaattcttcatgcctgttcatggtgaataccgcatgcaaaag
gtccacgcagatctcgctgttgattgtggtgttccgaaagagaatatctttatcatggaa
aatggtgatgtcttagccctaacaaaagattctgctcgtcgtgcaggtcatttcaatgct
caagacatctatgtcgatggtaatggtatcggtgatattggggcggccgttcttcgtgac
cgtcgtgatctctctggagatggtgtcgtccttgctgtcgcaactgttgacttcaattct
aagatgattctagctggtccagatattctcagtcgtggatttatctatatgcgtgaatct
ggtgatcttattcgtgatagccaacgcattctattcaacgctattcgtattgctcttaaa
aataaagacgccagcattcaatccgttaacggagctatcgtcaatgcattacgaccattc
ctatacgaaaaaacagaacgtgagccaattatcattcccatgattctcacacctgataac
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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