KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM2478
Entry
STM2478           CDS       T00065                                 
Name
(RefSeq) penicillin-binding protein PBP4B
  KO
K21469  serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm00550  Peptidoglycan biosynthesis
stm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:stm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    STM2478
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:stm01002]
    STM2478
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:stm01011]
    STM2478
Enzymes [BR:stm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     STM2478
Peptidases and inhibitors [BR:stm01002]
 Serine peptidases
  Family S12: D-Ala-D-Ala carboxypeptidase B family
   STM2478
Peptidoglycan biosynthesis and degradation proteins [BR:stm01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   STM2478
SSDB
Motif
Pfam: Beta-lactamase
Other DBs
NCBI-GeneID: 1254000
NCBI-ProteinID: NP_461413
UniProt: Q8ZN80
Position
2587867..2589165
AA seq 432 aa
MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDGWIQNQIDAGYPSINL
LVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNTKMYATNFALQKLVYEG
KIDVNDLVSKYIPGFKDMPGDKIKGKNKLRIIDILHHVAGFPADPQYPNKNVAGKLFSQS
KSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDRYVETTIYKPLGLKHT
VFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDEKAWYSMGGVSGHAGL
FSDTHDMAVLMQVMLNGGGYGNVKLFDDKTVAQFTRRSPEDATFGLGWRVNGNASMTPTF
GVLASPQTYGHTGWTGTLTSIDPVNHMAIVILGNRPHSPVANPKVNPNVFVSGLLPAATY
GWIVDQIYGSLK
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgaaatttactctcgttgcgacggttctactgacgttttccctttcagcttttgccgtt
gagtatcctgtattgaccaccgcgagccctgatcaggtggggtttgatagccaaaaactt
caccgacttgatggctggattcaaaatcaaattgatgccggatatcccagcatcaatctt
ctggtgataaaagataatcatattgttctacaaaaagcctggggctatgccaaaaaatat
gacggttccacgctgttagcccatcccattcgggcgaccactaacacgatgtatgatctg
gcttcaaacacaaaaatgtatgccactaacttcgcattgcaaaaactagtgtatgaagga
aaaatagatgtcaatgatttggtatcaaaatatatccccggctttaaggatatgcctggg
gataaaataaaaggcaaaaataaactccgcattattgatattcttcatcacgtcgcgggc
tttcctgccgacccacaatatcctaataaaaacgtcgccggtaaattattctcacagagt
aaaagcactactctggagatgattaaaaagacaccgctggaatatcaacctgggtcgaag
catatctacagcgacgtggattatatgattcttggttttatcattgaatcgataacggca
atgccattagatcgctacgtcgaaaccaccatttataaaccgctcggattaaaacatacc
gtctttaacccgctgatgaaaggcttcacgccgccgcaaatcgccgcaacggaactacat
ggcaacacgcgtgacggcgtgattcatttccccaatattcgcaccaatacactatggggc
caggtgcatgatgaaaaagcctggtactcaatgggcggcgtttcaggacacgccggactg
ttttctgacacccatgatatggctgtgttaatgcaagtcatgctcaatgggggcggctac
ggtaacgtgaagctattcgacgacaaaacggttgcgcagtttactcgccgctcgccagaa
gacgctacctttggtctggggtggcgcgttaacggcaacgcctcaatgacccccacgttc
ggggtattagccagtccgcaaacgtatggacataccggatggaccggaacgctgacgtct
atcgatccggttaatcatatggcgattgtgattttaggtaacaggccgcactcgccggta
gcaaatcctaaagtgaatccgaatgtttttgtcagtggattattacctgcggcgacgtat
ggctggattgttgaccagatatatggttccttaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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