KEGG   Salinispora tropica: Strop_1288Help
Entry
Strop_1288        CDS       T00504                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
stp  Salinispora tropica
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:stp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Strop_1288
Enzymes [BR:stp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Strop_1288
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Strop_1288
DNA repair and recombination proteins [BR:stp03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Strop_1288
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
1447321..1448184
Genome map
AA seq 287 aa AA seqDB search
MPELPEVETVRQGLAQWVTDRRIAEVQVLHPRAVRRHAAGAAHFADVLRETTVRDVRRRG
KYLWLPLDSGDAVVGHLGMSGQLLLQPAAAPDETHLRVRFRFADDGPELRFVDQRTFGGL
SVSAGGAELPTEIAHIARDPLDPEFSDATFVAALRRRRTEIKRALLDQTLLSGVGNIYAD
EALWRARLHGTRPTDGLTGPAVLRLLGHVRDVLGEAVKEGGTSFDALYVNVNGESGYFDR
ALNVYGRADQPCRRCGEPVRREAFMNRSSFSCPRCQPRPRRAVPARG
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgagctgccggaggtcgagaccgtccggcaggggctggcgcagtgggtgaccgac
cggcggatcgccgaggtgcaggtactgcacccgcgcgcggtgcgccgacacgcggccggt
gccgcccacttcgccgacgtgctcagggaaacgacggtccgggacgtgcggcggcgcgga
aagtacctgtggctaccgctggacagcggcgatgccgtagtcgggcacctcggtatgtcg
gggcagctgctcctgcagccggctgcggcaccggacgaaacccacctccgggtccggttc
cggttcgccgacgacggacccgagttgcgctttgtcgaccagcggacgttcggtgggttg
tcggtcagcgcggggggcgcggagctgcccacggagatcgcacacattgcccgggacccg
ttggacccggagttctccgacgccacgttcgtcgcggcgctccgccgccgccgtaccgag
atcaagcgggctctgctggatcagacgctgctctccggcgtgggcaacatctacgccgac
gaggcgctctggcgagctcggctgcacggcacccgccccaccgacgggctgaccggcccg
gccgtgctgcgcctgcttggacacgtccgggatgtgctcggcgaggcggtcaaggagggc
ggaacgagcttcgacgccctgtacgtcaacgtcaacggcgagagcggctacttcgatcgg
gcgctgaacgtatacgggcgggcggaccagccgtgccggcggtgcggtgaaccggtgcgc
cgcgaggcgttcatgaaccggtcgtcgttcagctgcccgcgctgccagccgcggccccgc
agggcggtaccggctcgcggctga

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