KEGG   Salmonella enterica subsp. enterica serovar Typhi Ty2: t0554
Entry
t0554             CDS       T00121                                 
Symbol
menD
Name
(GenBank) menaquinone biosynthesis protein
  KO
K02551  2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
Organism
stt  Salmonella enterica subsp. enterica serovar Typhi Ty2
Pathway
stt00130  Ubiquinone and other terpenoid-quinone biosynthesis
stt01100  Metabolic pathways
stt01110  Biosynthesis of secondary metabolites
stt01240  Biosynthesis of cofactors
Module
stt_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:stt00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    t0554 (menD)
Enzymes [BR:stt01000]
 2. Transferases
  2.2  Transferring aldehyde or ketonic groups
   2.2.1  Transketolases and transaldolases
    2.2.1.9  2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
     t0554 (menD)
SSDB
Motif
Pfam: TPP_enzyme_M_2 TPP_enzyme_N TPP_enzyme_C
Other DBs
NCBI-ProteinID: AAO68260
UniProt: Q8Z533
Position
629825..631495
AA seq 556 aa
MSVSAFNRRWAAVILEALTRHGVRHVCIAPGSRSTPLTLAAAENPAFIHHTHFDERGLGH
LALGLAKVSQQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAI
RQAGMFASHPSQTLSLPRPTQDIPARWLVSTIDNALAMLHAGALHINCPFAEPLYGDMND
TGLVWQQRLGDWWQDEKPWLREARRLASDKQRDWFFWRQKRGVVVAGRMSAEEGKKVAQW
AQTLGWPLIGDVLSQTGQPLPCADLWLGNAKAVTELQQAQIVVQLGSSLTGKRLLQWQAT
CVPEEYWVIDNIEGRLDPAHHRGRRLVAKIADWLELHPAEKRKPWCVEIPRLAELAWQRV
VAQRDTFGEAQLAHRIRDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDG
LLSTAAGVQRASAKSTLAIVGDLSALYDLNALALLRQVSAPFVLIVVNNNGGQIFSLLPT
PQSKRERFYLMPQNVHFDHAAAMFNLRYHRPENWEELESALAGAWRTPATTVIELVVNDT
DGAQTLQQLLAQVSHL
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtcagtaagtgcatttaaccggcgctgggcggcggtcatcctggaagccttaacccgt
catggcgtcaggcatgtttgtatcgcccctggttcccgttccacgccgctcacgttggcg
gcggcagagaatcctgcttttattcaccatacgcactttgatgagcgtgggcttggtcat
ttggcgttagggctggcgaaagtcagccaacagccggttgccgttattgtcacttcaggt
accgccgtggcgaacctctatccggcgctgattgaggcgggtctgacgggcgagaagctc
attttacttaccgccgatcgcccgccggagctgattgactgcggcgccaaccaggcgatc
cgtcaggcggggatgtttgcctcgcacccctcccaaactctgtcgttgccgcgtcccacg
caggatattccggcgcgctggctggtgtcgaccatcgacaatgcgctcgccatgcttcat
gcgggcgcgctgcacattaactgtccttttgccgaaccgctgtatggcgatatgaatgac
accggtctggtctggcagcagcgtctcggcgactggtggcaggatgaaaaaccctggctg
cgcgaagcgcgtcgactggcaagcgacaaacagcgcgactggttcttctggcgacaaaaa
cgcggtgtcgttgtcgccgggcgtatgagcgcggaagaaggcaaaaaagtggcgcagtgg
gcgcaaactctgggatggccattaattggcgacgtattgtcgcaaaccgggcagccgctg
ccgtgcgccgacctgtggctcggcaacgccaaagcggtgaccgaactgcagcaggcgcag
attgtcgtccagcttggcagtagccttaccggaaaacgcttactgcaatggcaggcaacc
tgcgtgccggaagagtactgggtaatcgacaatattgaaggtcgtctggacccggcgcac
catcgtggacgcagactggtagcgaaaatcgccgattggctggaactgcatccggcggaa
aaacgtaaaccgtggtgtgtagagatcccgcgtctggcggaactggcgtggcaacgggtg
gtcgcgcagcgagacacctttggcgaagcgcagctggcgcaccgtatccgcgactatctg
ccggagcaggggcaattgttcgtgggcaatagtctggtggtgcgtctgatcgacgcgctg
tcacagttgccggccggctatccggtatacagcaatcgcggggcgagcggcattgacggc
ctgctttccacagcggcgggcgtgcagcgcgccagcgccaaatcgacgttggctatcgtc
ggtgatttatccgcgctgtacgatcttaacgcgctggcgttactacgtcaggtatccgcg
ccgtttgtgttgattgtggtcaacaataacggcgggcagatcttttccctgctgccgacg
ccgcaaagtaagcgtgagcgcttttatctgatgccgcaaaacgtccattttgaccatgcg
gccgccatgtttaacctgcgctatcatcgcccggaaaactgggaagaactggagtctgcg
ctggctggcgcgtggcgaaccccggcgacaacggtgattgagctggtggtaaacgatacg
gatggcgcgcagacgctgcagcaacttttggctcaggtaagccatctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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