KEGG   Sulfurimonas autotrophica: Saut_1008
Entry
Saut_1008         CDS       T01316                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
sua  Sulfurimonas autotrophica
Pathway
sua03030  DNA replication
sua03430  Mismatch repair
sua03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Saut_1008
   03430 Mismatch repair
    Saut_1008
   03440 Homologous recombination
    Saut_1008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sua03032]
    Saut_1008
   03400 DNA repair and recombination proteins [BR:sua03400]
    Saut_1008
Enzymes [BR:sua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Saut_1008
DNA replication proteins [BR:sua03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Saut_1008
DNA repair and recombination proteins [BR:sua03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Saut_1008
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3
Other DBs
NCBI-ProteinID: ADN09057
UniProt: E0US34
Position
988059..991673
AA seq 1204 aa
MSKQPSFTHLHLHTEYSLLDGANKLSNLVSRVKELGMTSVAMTDHGNMFGAIDFYKQMKG
AGLKPIIGMEGYIHNGETLGDKSTKQRFHICLYAKNKKGYENLMYLSSKAFIEGFYYFPR
INKKELREHSEGLICTSACLQGEVNWHLNLQNERNVKNGALGYEGALNVAREYQDIFGND
FYLELMRHGIGDQLYIDEQILKISRETGIKIVATNDTHYTYPDDAQYHEAFMCIGMNKLY
DDPNRMRHSVHEFYIKSPDEMARLFADIPEALEHTQEITNKIEDFVPIVKTPTPPNFKFT
QEYAKEEGLDIDYQDDPPLADDASEEEKKKWLSAADKNDAEYFIIKCREGLEKRLKIVPK
ERHQEYRDRLEFEMDIINSMKFPGYMMIVWDFVKEAKRIGVAVGPGRGSAAGSLVAYSLE
ITDIDPMKYDLLFERFLNPERVSMPDIDMDFMQARRGEVIDYVTKKYGRNQVAQIITFGS
LLAKGVIRDVARVLDMPLSKADQMAKLVPDELGITLNGKTKNGEFKDGAFQKEPKLRELV
ESDPQVGRVWEFAKKLEGLKRNAGMHAAGVVISNEELWKKTPIYKPSGEDTFVTQYSLNY
MEDVDLIKFDFLGLKTLDVIDNAIKLIKRRYDKDIDWHTIDENDKNVYDVIQTGETVGMF
QIESSGMQDLNKRLKPSNFEDLIAVLALYRPGPMESGMLDDFIERKHGRQEITYVFEALE
EILKPTYGVIVYQEQVMQIVQTIGGFSLGGADIVRRAMGKKKVDEMLKYNKEFSEGAAKQ
GLDYKTASELFDLIEKFAGYGFNKSHSAAYAMVTFQTAWLKTYYPNEFMAALLTSDKDNT
EKVVRYIDEVKRMGIELSPPDICDSYLEFSAITKENREIILFGLGGIKGVGEAAIHAMIE
EREENGDYASLQDFVNRIEPSKVNKRVVEAIIKSGGFDRYGYSRKALLDQIELIVDTAKK
ASEAKKNVVGSLFGDDEEITTVRLELKNSDEYELKEILEFEKDTLGFYVSGHPMDDFREE
LDELNYTLSSELESIKDGSFAIFIGKVEEIQKKISKKGNQFGIVNLMDFHGNIEIMLFSD
KLEQLGEMDLEEPVAFKARVTHTDFGPRLNVTKIMTLKQAKKETKKVKTEIQEAPPEPIN
LAVRLSNNFDVLENLYSMIRQNPGNRPLKITIISKLHNVVIDSAIRVDSKIITALDGNEF
VDLI
NT seq 3615 nt   +upstreamnt  +downstreamnt
ttgagcaaacaaccctcttttacacatttacatctccatacagaatattcactgcttgac
ggtgcaaataaactctcgaatcttgtttcgagagtcaaagaacttggcatgacttcagta
gctatgactgatcatggcaatatgtttggagctattgatttttacaagcagatgaagggc
gcaggacttaaaccaattatcggaatggaaggttacattcataatggtgagactttgggt
gataaaagtacaaaacagcgttttcatatctgtttatatgccaaaaataaaaagggatat
gaaaatctcatgtatctctcttcaaaagcttttatagaaggcttttactactttccgcgt
atcaataaaaaagagcttcgtgaacatagtgaagggcttatctgtacttctgcatgtctt
cagggcgaagtaaactggcacttaaatcttcaaaatgaaagaaatgtaaaaaacggtgcc
ttagggtatgaaggtgcattaaatgtcgcacgagaatatcaagatatttttggaaatgat
ttttatcttgaacttatgcgtcacgggattggtgaccagctctatatagatgagcagata
cttaaaatttctcgtgagacaggtattaaaatagtcgcaacaaatgatacgcactataca
tacccggatgatgcacaatatcatgaagcttttatgtgtattggtatgaataaactttat
gatgatccaaatcgtatgcgtcactctgttcatgagttttatataaaatctccagatgaa
atggcaagactgtttgctgatattcctgaagcgctcgaacatacccaggagattacaaat
aagatagaagattttgtgccgattgtaaaaacaccaactccgcccaactttaaatttaca
caagaatatgcaaaagaagagggtttggatatagattatcaagatgaccctcctttagct
gatgatgcaagtgaagaggaaaagaaaaaatggttgagcgcggctgataaaaatgatgcc
gagtactttataattaagtgccgagaggggctggaaaaacgcctgaaaatagttccaaaa
gaacgtcatcaagaatatcgtgacagattagagtttgaaatggatattattaactctatg
aaatttcccggttatatgatgattgtatgggattttgttaaagaggcgaaacgtataggt
gttgcggttggacctggccgaggaagtgctgctgggagtttagttgcatattctttagaa
attacagatattgatcctatgaaatatgacctgctgtttgagcgttttttaaatcctgag
cgtgtaagtatgcccgatattgatatggactttatgcaggctcgtcgtggagaagttatt
gattatgtaacgaaaaaatatgggcgtaatcaggttgcacagattattactttcggttca
ctgcttgcaaaaggagttatccgtgatgttgctcgcgtacttgatatgccgctctctaaa
gcagatcagatggcaaaacttgttcctgatgaacttggtattacgctcaatggtaaaaca
aaaaacggtgaatttaaagatggtgcttttcaaaaagagccgaaactccgtgagcttgta
gagagtgatcctcaagttgggcgtgtttgggaatttgccaaaaaacttgaaggcctcaaa
cgaaatgccggaatgcatgcagctggtgtcgttatttccaatgaagagctttggaaaaag
acacctatttataagccatctggtgaggatacctttgtaacacagtactcgcttaactat
atggaagatgtagacttaatcaagtttgacttcttggggctgaaaacgcttgatgttatt
gacaatgcaattaagctgattaagagaagatatgataaagatatagactggcatacgata
gatgaaaatgacaaaaatgtttatgatgtcattcaaacaggtgaaacggtagggatgttt
caaattgaatcctccggtatgcaggatttgaataaacgattaaaaccttcaaattttgag
gatttaattgcggtcttggcactctatcgtccgggtcctatggagtcggggatgcttgat
gacttcatcgagcgtaaacacggacgtcaggaaattacctatgtttttgaagcgcttgaa
gagatactaaaacctacttacggagtaattgtttatcaagaacaggtaatgcagattgtg
cagaccattggaggattcagtcttggcggtgcagacattgttcgtcgtgctatggggaag
aaaaaagtcgatgagatgctcaaatataacaaagaattctcagaaggtgcagcaaaacag
ggactagattataagactgcatcagaactttttgatttaattgaaaagtttgccggatat
ggttttaacaagtctcactcggcagcctatgcaatggttacattccaaacagcatggcta
aaaacttactatccaaatgaatttatggcagcccttttaacgtccgataaagacaatact
gaaaaggttgtccgctacatagatgaagtaaagcgtatgggtattgagctttctcctcct
gatatctgtgactcatatttggagttttcagctattaccaaagagaatcgtgaaattatt
ctttttggtttgggcggcataaaaggtgtcggtgaagctgccatacatgcaatgatcgaa
gagcgtgaagaaaatggtgattatgcctctttgcaggattttgtcaatagaattgaacct
tcaaaagtcaataaacgtgttgttgaagcaattataaaatcaggcggatttgacagatac
ggctactcgcgcaaagcactattggaccaaatagaacttatagttgatactgcaaaaaaa
gcaagtgaagcaaagaaaaatgtagtcggcagtctttttggtgatgacgaagaaattaca
acagtgaggcttgaacttaaaaattcggatgagtatgaacttaaagaaatcttggaattt
gaaaaagacacgctgggcttttatgtctcagggcacccgatggatgattttcgtgaagag
ttggatgaattaaactatacgctctcttcagaacttgagagtattaaagatggttcattc
gctatatttatcggaaaagttgaagaaatacagaaaaaaatctctaaaaaaggaaatcag
ttcggtatagtgaacttgatggattttcatggaaatatagaaattatgcttttttccgac
aagttagaacaactaggtgaaatggatttggaagaaccggttgcatttaaggcaagagta
acacatactgattttggaccacgcttgaatgtaacaaaaataatgacgctcaaacaggca
aaaaaagagacaaaaaaagttaaaacagagattcaagaagcaccgcctgaaccaataaat
ctggctgtaagacttagtaataattttgatgtattggaaaatctctatagtatgataaga
caaaacccggggaatcgaccgctcaaaataacaataatttcaaaacttcataatgttgtt
atagactctgcaatacgcgtagatagtaaaattattactgccttggatggtaatgaattt
gtggatttaatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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