KEGG   Sulfurospirillum diekertiae JPD-1: SJPD1_0003
Entry
SJPD1_0003        CDS       T05109                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
sulj  Sulfurospirillum diekertiae JPD-1
Brite
KEGG Orthology (KO) [BR:sulj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sulj03032]
    SJPD1_0003
   03400 DNA repair and recombination proteins [BR:sulj03400]
    SJPD1_0003
Enzymes [BR:sulj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SJPD1_0003
DNA replication proteins [BR:sulj03032]
 Prokaryotic type
  DNA Topoisomerases
   SJPD1_0003
DNA repair and recombination proteins [BR:sulj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SJPD1_0003
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: ATB68138
UniProt: A0A290HKB0
Position
2824..5136
AA seq 770 aa
MSTYGADNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDEAMAGYCDLIKVE
LTREGSCIVIDNGRGIPVGWHEGENMSAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVSV
VNALSSKLIATIKREGNEHRQEFACGIPQTPLGVVKTTNRTGTMIEFWPDGTIFETTEFQ
FEILATRFRELAYLNPKIRIELKDQRDGRAEVYHFEGGIKQFVMDLNKKEKVAEAVHYTA
SIDDVEVDVAMMYNSTYSEIFYSFVNNIKTIDGGTHESGFRAGLTRAITNYISLNAGARE
KDAKITGDDVREGLIAIVSVKVPEPQFEGQTKGKLGSSYVKPIVQKLVYEQLVKYFEENP
IEAKAIMNKALAAARGREAAKNARDLTRRKDAMSIGTLPGKLADCQSKDPSICELYLVEG
DSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIKNMITALGCGIGDEFNEE
KLRYHKLIIMTDADVDGSHIQTLLLTFLFRFLRPIVDNGYVYLAQPPLYRYKKGKKEIYL
KDDHEMNAFLIESGMDSIAIEGVGTPDLVDYFKIISAYRGILKELEKRFAMIEVIRYLIE
NPDLIVLPTEGLFVEIQKFITNLGYNILNHYINDEGIHLFIQTKDGLEELLLDETFYTNP
LYEEARYIYTKIQERDFDVFDGKDPVEVLDEIEKSAKKGAYIQRYKGLGEMNPEQLWETT
MNPENRRLLQVKVEDAEAASDTFTLFMGDEVEPRRQYIQDHAKDVKHLDV
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgagtacttacggtgcagacaatattaaagttttaaaaggccttgaagcagtacgaaag
cgtccaggtatgtatattggtgataccaacattaatggtcttcatcaccttatttatgaa
gtggttgataactctattgatgaagcaatggcaggctattgtgatctgattaaagtggaa
cttacacgtgaaggttcatgtatcgttattgataatggtcgtggtattcccgttggttgg
catgagggtgaaaatatgtcagcggcgacggttgttttaaccgtacttcatgcaggtgga
aagtttgataaagatacctataaagtgagtggtggtttacacggtgttggtgtttcggtt
gtaaatgccctctcatctaaacttattgctacgattaaacgtgaaggaaatgagcatcgt
caagaatttgcatgtggtattcctcaaacaccattaggtgtggttaaaacaaccaatcgt
acgggtacaatgattgagttttggcctgatggtactatttttgaaacaacagaatttcaa
tttgaaattttggcaacacgtttccgagagcttgcttatcttaacccaaaaattcgaatt
gaacttaaagatcaaagagatggacgtgctgaagtgtaccactttgaaggtggtattaaa
cagtttgtaatggatctcaataaaaaagaaaaagtagcagaagctgttcattatactgct
agcattgatgatgttgaagttgatgttgcgatgatgtataactcaacctacagtgaaatt
ttctactcttttgttaataacattaaaaccattgatggtggaacccatgagagcggtttt
agagcaggactgacacgtgctattaccaactatatctctttaaatgcaggagcacgtgaa
aaagatgccaaaataacgggtgatgatgttcgcgagggtttgattgctattgtcagtgtt
aaagtacctgaacctcaatttgagggtcaaaccaaaggaaaattgggtagttcttacgtt
aaacccattgttcaaaaattggtctatgaacaactggttaaatattttgaagaaaaccct
attgaagccaaagcgattatgaacaaagcgcttgcagcagcacgtggtcgtgaagcggct
aaaaacgcacgtgatctaacacgaagaaaagatgccatgagcattggtacacttcctgga
aaattggcagattgtcaaagtaaagatccaagtatttgtgaactttacctcgtagagggc
gatagtgcgggcggttctgcaaaacagggacgtgacagggtttttcaagctattttgcca
cttaaaggtaaaattcttaacgttgaaaaaagccgtttagacaaaattttaaaatccgat
gaaattaaaaatatgattactgccttaggatgcggtattggtgatgaatttaacgaagaa
aaacttcgttaccacaaactaattattatgaccgatgcggacgtcgatggtagccatatt
caaacccttcttttaacattccttttccgctttttgcgtcctattgtagataatggttat
gtctatttagcgcagccaccactttaccgttataaaaaaggtaaaaaagagatttatctc
aaagatgatcatgaaatgaatgcttttttaattgaatcaggtatggatagtattgcgatt
gaaggtgttggaactcctgatttagtggattactttaaaattatttctgcgtatagaggt
attttaaaagagcttgaaaaacgttttgctatgatcgaagtaattcgttatttaattgaa
aatccagatttgattgtacttcctacggaaggattatttgttgaaattcaaaaatttatt
acaaaccttggttacaatattttaaatcattacatcaatgatgaaggaattcatctcttt
attcaaaccaaagatggtttagaagaacttcttttagatgaaacgttctataccaatcct
ctttatgaagaagcacgttacatttatacaaaaatacaagaacgtgactttgatgtgttt
gacggcaaagatcctgttgaagtgttagatgaaatcgaaaaaagtgctaaaaaaggtgct
tatatccaacgctacaaaggtcttggtgaaatgaatccagaacaactttgggaaacaact
atgaatcctgaaaacagacgccttttacaagttaaggttgaagatgcagaagcagccagt
gacacctttaccctctttatgggtgatgaagttgaacctcgccgacagtacattcaagat
catgccaaagatgtaaaacacttggacgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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