KEGG   Streptococcus suis SS12 (serotype 1/2): SSU12_0213
Entry
SSU12_0213        CDS       T02025                                 
Name
(GenBank) hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
suo  Streptococcus suis SS12 (serotype 1/2)
Pathway
suo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:suo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SSU12_0213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:suo03400]
    SSU12_0213
Enzymes [BR:suo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SSU12_0213
DNA repair and recombination proteins [BR:suo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SSU12_0213
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 UvrD_C_2 SH3_13 Viral_helicase1 AAA_11 HHH_5 AAA_12 UvrD-helicase Herpes_Helicase DEAD AAA_22 SLFN-g3_helicase UvrD_C AAA_28 T2SSE 5_3_exonuc nSTAND3 AAA_29 AAA HHH
Other DBs
NCBI-ProteinID: AER14410
Position
complement(211650..214139)
AA seq 829 aa
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYG
NLVTHPKYGQQLQISRYERSKPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKIL
AEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEYGIPNKLAFQIQDQYKEKTLQ
IIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHTNL
TRLMGKNGFKPFPRADVEAAIAELESISSLTYDNIQKEAIVQAITNPLFILTGGPGTGKT
TVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRATRRMNELTGLPSATIHRHLGLVEG
QEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPA
LIERIVGAAIKSGIPANEVQILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAF
RQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDEITINFDGSEVTYPRNEWYKI
TLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQESKESLIKKDESKTATTTQTQPPTQPDRKEQVKVVKEN
NQQLSLLDQDQPEKTSPQPTEYILTVDNLLTIDPMIGIEQADIEEFFKA
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgaacgaagtgtattttaccggtactattgaccggattatttttgaaaatcctagtaat
ttttataaaatccttctccttgaaatcgaggagacagacgcagactatgatgactacgaa
attattgtgaccggaacgattgccgatgtcattgaaggagaagactatcgtttctatggc
aatctggtcacccatcccaagtatggtcagcagctgcaaatttcgcgttacgaacgcagc
aagcctacctcagctggtctggtcaagtatttctccagcgagcatttcaagggaattgga
cgcaaaacagctgaaaaaatcgttgagctctatggcgaagataccattgataagatttta
gctgaacctgaaaaactaacccaaatcacaggcctatccagcaagaacatgcaggcattt
gtcgaaaaactccgcctcaattatggaaccgagttgatcttggcaaaactagccgagtat
ggcattcccaataaattggcctttcaaatccaagaccagtataaggaaaaaacacttcag
attattgaagaaaatccctatcaactggtcgaagatgtccaggggctcggctttaccatt
gccgataggattgcggaaaatctaggaattgccagtgattcaccccaacgttttcgggct
ggcatgctctttagtctcattcatcgctccatggaaacaggcgatacctatgtggaggcc
agagacttgctggaagcaacccttgaactgctggaaaaatcccgccatacagagctggac
cccgctgctgttgccaaagaattgacgggactgattgcagacgacaaggtacagcaagaa
ggcacaaagatttttgacaacagcctctactttgccgaacatggtatccatacaaaccta
actcgcctgatgggaaaaaacggcttcaagcccttcccacgcgcagacgtcgaggctgcc
atagcagagctggaaagcatatcttctctcacctacgataacattcaaaaagaagccatt
gtccaagccattaccaatccgcttttcattctgacaggcgggccagggactggaaaaaca
acggttatcaacggcattatcgcagtctatgctatcttgcataagattgacctgacgcga
aaccgagaagaatgcccagtcctcctagccgctccaactggacgagcaaccagacggatg
aatgaattgacagggctgccttccgccaccatccaccgccatctcggtctggtagaagga
caggaggaatcctaccgtgatgattatttggatgccgactttatcatcgtggatgagttt
tctatggtagatacttggttggcaaaccagctcttccagaatatctcctcccagacccaa
gttctgattgtcggcgatgccgagcaattgccttctgtcagccccggtcaagtacttgct
gacctcttgaaaattgacaagctgcccagcattactctagaacgtatctatcgtcaatcc
gatgattcgaccattgttaccctagccagccagattcgacagggtgctctgcctagcgat
tttcgtgagaaaaaggctgaccgttcctattttgaagcccagaatgaacaaattccagcc
ctgattgagcgcattgtcggcgcagccatcaagtcaggtattcctgcaaacgaggtacag
atcctcgctcccatgtaccgtggggccgcaggcatcgaccaactcaacactatgacccag
gccctgctcaatccactggaagagggagagttagaattcctgcataacgagcaagccttc
cgccaaggcgaccgggtcattcatttagtcaacgatgccgaggccaatgtcttcaatggt
gatttaggctacatcaccgacctccttcctgccaagtacaccgactccaagcaggacgaa
attaccatcaacttcgacggtagcgaggtcacctatccccgaaacgaatggtacaagatt
accctggcctatgccatgtccatccacaagtcccaaggcagcgagtttcaggtagtcatc
ctccccatcacccgcaccagccaccgtatgctccagcgcaatctggtctacaccgccatc
acccgctccaagagcaagctcatcctcctgggcgaaatctccgccttcgactacgccgtc
aaaaacgccggcaccgtccgaaaaacctatctggtcccacgtttccaaggggaaatggca
gagcaggaaagcaaggaaagcctgattaaaaaagacgaaagcaaaacagctacaaccacg
caaacccagccccctactcagccagacagaaaagaacaggttaaagtagtcaaagaaaac
aaccaacaactctcccttcttgatcaagaccagccagaaaaaacaagtccccaacccaca
gaatacattttgactgtagacaacctactaaccatcgaccccatgattggcatagaacag
gcagatattgaagaattttttaaagcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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