KEGG   Sporosarcina ureae: SporoP32a_01945
Entry
SporoP32a_01945   CDS       T04877                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
sure  Sporosarcina ureae
Pathway
sure03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sure00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SporoP32a_01945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sure03400]
    SporoP32a_01945
Enzymes [BR:sure01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SporoP32a_01945
DNA repair and recombination proteins [BR:sure03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SporoP32a_01945
    RecFOR pathway proteins
     SporoP32a_01945
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 AAA_25 NB-ARC nSTAND3 AAA_22 TsaE Sigma54_activat AAA_14 Bac_DnaA AAA_24 IstB_IS21 AAA_3 DUF815 Sigma54_activ_2 AAA_18 MCM RNA_helicase Rad17 NACHT NTPase_1 TniB AAA_19 Parvo_NS1
Other DBs
NCBI-ProteinID: ARK20413
Position
complement(384899..385897)
AA seq 332 aa
MDERILTNEATDFDDSFEQSLRPQLLQQYIGQQQAKDNLSIFIEAAKKREESLDHVLLYG
PPGLGKTTLATVIGNEMGVNVRMTSGPAIERPGDLAAVVSSLEPGDVLFIDEIHRLNRAI
EEVLYPAMEDFCLDIMVGKGPTARSVRLDLPPFTLIGATTRAGALSAPLRDRFGVPLRLE
YYEVESLTEIVIRSANLFEVDIDPLAAVELAKRSRGTPRIANRLLRRVRDYAQVRGNGII
TLSIAQEALDMLQVDHHGLDQIDHQLLHSMIERFRGGPVGIDTLAASIGEESVTIEDVYE
PYLLQMGFIQRTSRGRMATEKAYEHFGYPLPE
NT seq 999 nt   +upstreamnt  +downstreamnt
atggatgaacgcatactgacgaatgaagcgacggattttgatgatagttttgaacagtca
ttacgcccgcaattattacaacaatatattggtcagcaacaggcgaaagataatttatcg
atctttatcgaggcggcaaagaagcgggaagaaagtttggatcatgtcttgctgtatggt
cctcctgggcttggaaaaacgacgctcgcgacggtaataggcaatgaaatgggtgttaat
gtccgcatgacgagcggtccggctattgaacgtccgggtgacttggcggcagtagtgtct
tcgttggagccgggcgacgtcttattcatcgatgaaatccaccggctaaaccgcgcgatt
gaagaagtgctgtatcccgcaatggaagatttttgtctcgatattatggtcggaaaaggt
ccgactgcgcgttctgtgcgactggatttgccgccgtttacattgattggtgcgacgaca
cgtgcaggggcattgtctgcaccgctccgtgaccgttttggtgtaccgcttagactagag
tattatgaagtggaatcattgacggagatagtcattcgaagcgcgaatttatttgaagtg
gacattgatccgttagcggctgtagaactggcgaaacgctcgcgtggaacgccacgtatt
gcaaatcgtctattgcgtagagttcgcgattatgcacaagtgcgcggaaacgggatcatt
acactttcgattgcacaagaagcactcgatatgctacaagtggatcatcatggactcgac
caaatcgaccatcagttgctccacagcatgatcgaacggttccgtggcggtccagtcggc
attgatacgctcgctgcaagtattggcgaagaatcggtgacgattgaagatgtctatgag
ccgtatttattacaaatgggatttattcaacgtacatcaagaggtcggatggcgacagaa
aaggcttacgagcatttcggttatccgcttcctgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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