KEGG   Shewanella violacea: SVI_3651
Entry
SVI_3651          CDS       T01206                                 
Name
(GenBank) ribosomal pseudouridine synthase family protein
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:svo03009]
    SVI_3651
Enzymes [BR:svo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     SVI_3651
Ribosome biogenesis [BR:svo03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SVI_3651
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: BAJ03622
UniProt: D4ZC77
Position
4132109..4132861
AA seq 250 aa
MTQDKPSMRLAKYLAMTGLCSRKAATRYIRDGHITLDGRLANHIDTISLIESPSGLTSLE
ILKFDGVLIQGVESKQYWMLNKSVGTDCRLLAHDPSSLLHLLPDNPRLYPVGRLDKDSRG
QLILTNDGELTQQLMHPDFGHSKTYHVQVDGNFEDSFLIKMAQGVSYRDVTTLPCKMTRL
NDNKFEIILTQGLNRQIRRMSQALGYKVVDLKRVNIQSLALGDLKEGEMRQLTALEQALL
IESCRPSNEG
NT seq 753 nt   +upstreamnt  +downstreamnt
atgactcaagataaaccaagtatgcggctggctaaataccttgccatgacaggactctgc
tcccgtaaggccgcgactcgctatattagagacggccatataaccctagatgggcgtctg
gccaatcatatcgataccatcagcttaatcgagagcccatcaggccttactagcctagag
atactcaaattcgatggagtgcttattcagggtgtcgaatctaagcagtattggatgctg
aataaatctgtcggcacagattgtcgcctcttggcccatgaccccagctctctgttgcat
ctattgcctgacaatccacgcctctacccagtgggccgtttagacaaggactcccgtggc
cagttgatattgaccaatgatggtgagcttacgcagcagttaatgcacccagatttcggt
catagcaagacttatcatgtacaagtcgatggcaatttcgaggatagtttcttaatcaag
atggcccaaggcgtcagctaccgagatgtcaccaccctcccctgtaagatgacccgcctt
aatgataacaagtttgagatcatactcacccaagggctcaaccgacagatccgccgcatg
agtcaggcattaggctataaggttgtcgaccttaaacgggtaaacattcaaagtttagcc
cttggcgatctaaaagaaggagagatgagacaactgacagctttagagcaggctcttctc
atagagagttgccgaccttcgaatgaaggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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