KEGG   Shewanella woodyi: Swoo_0429
Entry
Swoo_0429         CDS       T00676                                 
Name
(GenBank) protoheme IX farnesyltransferase
  KO
K02257  heme o synthase [EC:2.5.1.141]
Organism
swd  Shewanella woodyi
Pathway
swd00190  Oxidative phosphorylation
swd00860  Porphyrin metabolism
swd01100  Metabolic pathways
swd01110  Biosynthesis of secondary metabolites
swd01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:swd00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    Swoo_0429
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    Swoo_0429
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:swd01006]
    Swoo_0429
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:swd03029]
    Swoo_0429
Enzymes [BR:swd01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.141  heme o synthase
     Swoo_0429
Prenyltransferases [BR:swd01006]
 Compound prenylation
  Protoheme farnesyltransferase
   Swoo_0429
Mitochondrial biogenesis [BR:swd03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    Swoo_0429
SSDB
Motif
Pfam: UbiA
Other DBs
NCBI-ProteinID: ACA84727
UniProt: B1KQ72
Position
complement(531361..532293)
AA seq 310 aa
MNIQGRFMSKQWLSRLKGYVQVIKPGIIMGNLISVTGGFLLAAKGSVDLTLMLMTILGLS
LVVASGCGLNNCIDRDIDAKMQRTRNRVTVTGEISVYSVLVFSLALGLIGFGLLAIFTNK
IALLFAVIGYLVYVGIYSLYMKRHSVYGTLIGSFSGAVPPVVGYCAVTGEIDTGAVILLL
MFSLWQMPHSYAIAIFRYKDYAAAKIPVLPVAKGMTRAKLHIVLYIAVFSLVSALLPLAG
YTGIAFMAVTCATSLWWLGMALKGYQRDINLNQWARQVFGCSIVTITALSIAMAMDFQLV
VQTPLLTLSN
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaatattcaaggtcggtttatgtctaagcagtggctgtcacgtttaaagggatatgtt
caggtgattaagcctggcatcatcatgggaaatttgatctccgttacggggggattcctg
ttagccgccaaaggtagcgtagacttgaccttgatgttgatgacaatattaggtttgtcc
ttagtcgtagcatcaggctgcggccttaataactgtatcgatagggacatcgatgccaag
atgcagcgcacccgaaatagagtgactgtcacgggtgagatatcagtatattcagtgctg
gtattcagtttagctttgggcctaataggctttggtttattggccatatttaccaacaag
attgctctgttatttgccgtgattggttatctggtttatgtggggatctatagcctctat
atgaaacgacactctgtctacggcaccttaatcggcagcttttcgggagccgtgccgccg
gtagttggctattgtgcggtcacaggagagatagatactggcgcagtcattttactcttg
atgtttagcttgtggcagatgcctcactcttatgccattgccatctttcgatataaagat
tatgccgcagcgaaaattcccgtgttgcccgttgccaaagggatgactagggctaagctg
cacatagtactttatattgccgttttttctttagttagcgccttgctccccttggcaggt
tacacagggatcgcctttatggcagtaacctgtgccaccagcttgtggtggcttggaatg
gcactaaaaggttaccaacgtgatatcaatcttaatcaatgggcaaggcaagtgtttggt
tgctctattgtaaccattacagctttgagtatcgctatggcaatggattttcaacttgta
gtacagacacccctactaactttgtctaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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