KEGG   Shewanella woodyi: Swoo_4734
Entry
Swoo_4734         CDS       T00676                                 
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
swd  Shewanella woodyi
Pathway
swd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:swd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Swoo_4734
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swd02044]
    Swoo_4734
Secretion system [BR:swd02044]
 Type II secretion system
  General secretion pathway protein
   Swoo_4734
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ACA88984
UniProt: B1KN27
Position
complement(5711952..5714096)
AA seq 714 aa
MNKKNIRRKLIASLVMGASLLAPQLAWSEQYAANFKGTDIQEFINIVGKNLNRTIIVDPT
VRGKINVRSYDLLNDEQYYQFFLNVLQVYGYAVVEMDNNIIKVIKDKDAKTAAIRVADDK
TPGLGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVVNYDPSNVLMISGRAAVVNKL
VEIVRRVDKQGDTEVQVVPLEYASAGEIVRIIDTLYRSTGNKSQMPGQAPKVVADERMNA
VIVSGDEKSRLRVVSLVKKLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAEKLVNDKDG
GGGQAGGKKRRNEINIMAHDDTNALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEV
SEGDDVGFGVQWATAAGGGTQFNNLGPTIGEIGAGVWNARDQKASQTCSGSGDNQTCTDN
PDTPGDITLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTKSNVLATPSITTLDNQEASF
IVGDEVPILTGAQNSSNGNSNPFQTVERKEVGVKLKVVPQINEGSSVKLTIEQEVSGING
KTGVDVTFATRRLTTTVMADSGQIVVLGGLINEEVQESVQKVPFLGDIPIIGHLFKSSSS
GKKKKNLMVFIKPTIIRDGITMEGIAGRKYNYFRALQMEQQERGINLMPNSEVPVLEEWN
QADYLPPEVNDILERYKEGKGLETKMRQTDSTLKSISDNKETDTDTASEDSHDE
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgaataagaagaatattcgcaggaagttaatcgcaagtttagtgatgggggcatcttta
cttgctcctcaacttgcttggtctgagcagtatgcggctaatttcaaagggactgatatt
caagagtttatcaacattgttggtaagaaccttaataggactatcattgtcgatcctact
gtgcgcggtaaaatcaatgtccgcagttacgatctgctcaacgatgagcaatattatcaa
ttcttcctcaatgtacttcaggtttatggttatgccgtcgtcgagatggataacaacatc
atcaaggtcatcaaagataaagatgcaaaaacagccgctattcgtgtggccgatgataaa
actcccggcttaggcgatgagatggtgacgcgaattgttgccctctacaacacagaagct
aagcagcttgctccgctacttcgtcagcttaatgataatgccggtggcggtaacgtggtt
aactatgacccatccaatgtcttgatgatctctggccgtgctgccgtagtgaataagttg
gttgagattgttcgccgcgtcgataagcaaggtgatactgaagttcaggttgtgccactc
gaatacgcctctgcaggcgagatagtgcgcattatcgataccttatatcgctctaccgga
aataaatctcagatgcctggccaggcaccaaaagtggtggctgatgagcgtatgaatgcc
gtcatcgttagcggtgacgagaagagccgcctacgtgtggtttcgttagtgaaaaaactc
gatgccgagcaagccagcacaggtaatactaaggtacgttatctcagatacgctaaagcc
gaagatctggttgaggtgttaacaggttttgctgagaagctagtcaacgacaaagatggc
ggcggtggacaagccggtggtaagaagcgccgtaatgagatcaacattatggcccatgat
gacaccaacgctttggtgatcagtgctgagccagatcagatgcgtaccattgaaagtgtt
attaaccagttagatattcgccgtgcacaggttttggttgaagcgattatcgttgaggtc
tcagagggcgatgatgtcggtttcggtgttcagtgggcaaccgcagcaggtggtggtact
cagtttaataatttaggcccgactatcggcgagattggtgctggtgtttggaatgctaga
gatcaaaaagcctctcaaacctgtagtggttcaggcgacaatcaaacctgtaccgataat
ccagatactcccggtgatattaccttgctagctcaagcgttaggcaaggttaatggtatg
gcgtggggcgtggccatgggtgacttcggtgcactgatccaagctgtttctagcgatacc
aaatcaaatgttttagcgacaccttcaatcacgacactagataaccaagaagcgtcattt
attgttggtgatgaagtgcctattttaacgggcgcgcaaaactcaagtaacggcaacagt
aacccattccaaaccgttgagcgtaaagaggtgggagttaagctcaaggttgtgccgcaa
attaacgaaggtagctcggttaagctgaccattgagcaagaggtgtcaggcattaacggt
aaaacaggtgtcgatgtgacctttgctacgcgccgtttgaccactactgtgatggctgat
tcggggcagatcgttgtgctaggtggcttgattaatgaagaggtgcaggagagtgtgcag
aaggtacctttccttggtgatatcccgatcattggtcacctgtttaagtcctcatcaagc
ggtaagaaaaagaaaaatctgatggtgtttattaagccaacgattattcgtgatggcatc
accatggaaggcatcgcaggtcgtaaatataactatttcagagcactacagatggagcag
caggagcgtggtattaacctaatgccaaacagcgaagtacctgttcttgaagagtggaat
caagcagattacctacctcctgaagtgaacgatattcttgagcgttacaaagagggcaaa
ggtttagagactaagatgcgtcaaacagactctaccctgaaatctatctcagataataaa
gagactgataccgatactgccagcgaagatagtcatgatgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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