KEGG   Shewanella piezotolerans: swp_3811
Entry
swp_3811          CDS       T00791                                 
Name
(GenBank) Choline dehydrogenase
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
swp  Shewanella piezotolerans
Pathway
swp00260  Glycine, serine and threonine metabolism
swp01100  Metabolic pathways
Module
swp_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:swp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    swp_3811
Enzymes [BR:swp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     swp_3811
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C Lycopene_cycl FAD_binding_2 NAD_binding_8 Pyr_redox_2 HI0933_like ApbA DAO Thi4 TrkA_N GDI
Other DBs
NCBI-ProteinID: ACJ30490
UniProt: B8CQM4
Position
4028290..4029990
AA seq 566 aa
MTSISNEKYDYIIVGAGSAGCVLANRLSADANNKVLLLETGGSDKSIFIQMPTALSIPMN
TAKYAWQFETEAEPHLDNRRMHCPRGKVLGGSSSINGMVYVRGHARDFDEWQQEGAKDWD
YAHCLPYFKKAESWAFGGDDYRGVAGPLAVNNGNEMKNPLYKAFVDAGVDAGYLATDDYN
GAQQEGFGAMHMTIKNGVRWSTSNAYLRPAMKRSNLTVITHALVHKVLFSTKAGESKKAV
GVHFERKGKHIEVNANKEVILSAGSVGSPHILQLSGIGAADTLKQAGIEQVHELPGVGEN
LQDHLEFYFQFKCLKPISLNGKLDPLNKLFIGTRWILNKSGLGATNHFESCGFIRSKAGL
EWPDLQYHFLPAAMRYDGKEAFAGHGFQVHIGHNKPKSRGSIKVLSSDAHVAPSIQFNYL
SHQDDIEGFRACVRLTREISNQNALDEYRGEEIQPGISVQTDEQIDSFVRSSVESAYHPS
CSCKMGEDAMAVVDSQTRVHGMEGLRVVDSSIFPTIPNGNLNSPTIMVAERAADLILGHS
PLSPSTAPVITANNWQQQQRNHLPKR
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgacctctatatcaaatgaaaagtacgactatatcattgttggtgcagggagtgcgggc
tgtgtactcgccaaccgcctatctgccgatgccaacaacaaagtgctgctactggaaacc
ggtggtagtgacaagagcatctttatccagatgccaacggcactgtctattccaatgaat
accgctaagtatgcctggcagtttgaaaccgaagctgagccgcatcttgataaccgccgt
atgcactgccctcgcggcaaggtactgggcggttcgtcatcaattaacggcatggtctat
gtgcgtggccatgcgcgtgattttgatgagtggcagcaagagggtgctaaagattgggat
tatgcccattgcctgccctacttcaaaaaagcagaaagctgggcatttggtggagacgat
taccgcggcgtagccgggcctcttgcggttaataacggcaatgagatgaaaaatccgctc
tataaagcctttgttgacgctggagttgatgctggttacttagccactgatgactacaac
ggcgcacagcaagaaggttttggcgccatgcacatgaccattaaaaatggtgtgcgctgg
tcaacctctaatgcttatctgcgccctgcgatgaagcgcagtaacctcactgttatcacc
catgctctggtacataaagtgttgttctcgactaaagctggcgaaagcaaaaaagcggtc
ggggtgcactttgagcgtaaaggtaagcacatagaggtcaacgccaataaagaggtcatc
ctctcggctggctctgtcggttcgccgcacattctacagctatcaggtattggcgcagcc
gatacgctaaaacaagctggcattgagcaagtccatgaactgccaggggtcggtgaaaac
ctacaagatcacttagagttctacttccaatttaagtgccttaagccaatatcgcttaac
ggcaaactcgacccgttgaataagctatttatcggtacccgttggatcttaaataaatct
ggactgggcgccactaatcactttgagtcttgtggctttattcgctcaaaagctggactt
gagtggccagacttacaatatcacttcttgcctgctgccatgcgctatgacggcaaagaa
gcttttgcaggccatggttttcaggtgcacattggccataacaagcctaaaagccgcggc
agtattaaagtgctttctagtgatgcgcatgttgcgccaagtattcagtttaattacctg
tcgcatcaagatgacattgaaggctttcgcgcctgtgttcgccttactcgcgagatcagc
aatcagaacgcactcgatgaatatcgcggcgaagagatccagccaggtattagcgtgcaa
accgatgagcagatagacagttttgtcagaagctctgttgagagtgcttaccacccatct
tgctcatgcaaaatgggcgaagacgcgatggctgtggttgattcgcaaacccgagtacac
ggcatggaaggccttagagtggttgattcctctattttccctaccattccgaacggcaat
ttaaattcgccgaccattatggtcgcagagcgagcagcagacttgattttaggtcatagc
ccattatcgccgagtacagcgccagtgattaccgccaacaattggcagcaacaacagcgc
aaccatttacccaagagatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (28)   

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