KEGG   Streptomyces xiamenensis: SXIM_22270
Entry
SXIM_22270        CDS       T03904                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sxi  Streptomyces xiamenensis
Pathway
sxi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sxi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SXIM_22270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sxi03400]
    SXIM_22270
Enzymes [BR:sxi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SXIM_22270
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SXIM_22270
DNA repair and recombination proteins [BR:sxi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SXIM_22270
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zf-TFIIB Ribosomal_S13 zf-RRN7 NFACT_N
Other DBs
NCBI-ProteinID: AKG43611
UniProt: A0A0F7CNW3
Position
2394471..2395382
AA seq 303 aa
MPELPEVEALRDFLTGHLVGREVATALPVAFHVLKTYDPPLTAVAGRTVTGVARHGKFLD
LTLGGGQDPPLHLITHLARAGWLRWQEKLPAAPPRPGKGPLALRVTLAELPPDSSSRERP
AGEGFDLTEAGTQKRLAVYVVRDPAEVPGIARLGPDPLADAFTAEALAAILDGERRQLKG
VLRDQSTIAGIGNAYSDEILHVARMSPFKPAGNLTPSETAALHEAIRTTLGDAIARSRGV
AAGKLKAEKKSGLRVHGRTGEPCPVCGDTIREVSYRDSSLQYCPTCQTGGKPLADRRTSR
FLK
NT seq 912 nt   +upstreamnt  +downstreamnt
atgccggaacttcccgaggtcgaggcactgcgcgacttcctcaccggccacctcgtggga
cgcgaggtggccaccgcgctgccggtggccttccacgtactgaagacgtacgacccgccg
ctgaccgccgtggccgggcgcacggtgacgggcgtggcccggcacggcaagttcctggac
ctgacgctcggcggcgggcaggaccccccgctgcatctgatcacccacctggcgcgggcc
ggctggctgcgctggcaggagaagctgccggccgcgccgccgcgccccggcaagggcccg
ctggcgctgcgcgtcaccctcgccgagcttcccccggactcctcctccagggagaggccc
gcgggtgagggcttcgacctgaccgaggccggcacccagaagcggctggcggtgtacgtg
gtccgcgacccggccgaggtccccggcatcgcccggctcggcccggatccgctcgcggac
gcgttcaccgccgaggccctggcggcgatcctcgacggggagcgccggcagctcaagggc
gtgctgcgcgaccagtcgaccatcgccgggatcggcaatgcctactcggacgagatcctg
catgtcgcgcgcatgtcacccttcaagcccgcaggcaacctgaccccatccgagaccgcc
gccctccacgaggcgatccgcaccaccctgggtgacgccatcgcccgctcccggggcgtc
gccgccggaaagctcaaggcggagaagaagagcggactgcgcgtccacggccgcaccggc
gaaccctgcccggtgtgcggggacaccatccgcgaggtgtcctaccgggactcctcgctc
cagtactgccccacctgccagaccggcggcaaaccgctggccgaccggcgcacctcacgc
ttcctgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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