KEGG   Streptomyces xiamenensis: SXIM_52840
Entry
SXIM_52840        CDS       T03904                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sxi  Streptomyces xiamenensis
Pathway
sxi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sxi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SXIM_52840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sxi03400]
    SXIM_52840
Enzymes [BR:sxi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     SXIM_52840
DNA repair and recombination proteins [BR:sxi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SXIM_52840
 Prokaryotic type
     SXIM_52840
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AKG46668
UniProt: A0A0F7G0J0
Position
5743844..5744533
AA seq 229 aa
MIGMLPASWQGPLGEELGKPYFKELTEFVEEERARGPVFPPREEVFAALEATPYDRVKVL
ILGQDPYHGKGQGHGLCFSVRPGVKTPPSLRNIYKEMHSELGLPIPDNGYLMPWAQQGVL
LLNAVLTVREGEANSHKGKGWETFTDAVIRAVDARPDPAVFVLWGNYAKKKLPLIDTERH
VVVQGAHPSPLSAKKFYGSRPFTQINEAVAAQGHTPIDWRIPDLAASAS
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgatcggcatgctgcccgcatcctggcagggcccgctcggcgaggaactcggcaagccc
tacttcaaggagctcaccgagttcgtcgaggaggagcgggcccggggcccggtgttcccg
ccccgcgaggaggtcttcgcggcactggaggccaccccgtacgaccgggtgaaggtgctg
atcctgggccaggacccgtaccacgggaagggccaggggcacgggctgtgcttctcggtc
cgccccggggtgaagaccccgccctcgctgcgcaacatctacaaggagatgcacagcgaa
ctgggcctccccatccccgacaacggctatctgatgccgtgggcccagcagggcgtgctg
ctgctcaacgcggtgctgacggtgcgcgagggcgaggccaactcgcacaagggcaagggc
tgggagaccttcacggacgcggtgatccgcgccgtcgacgcccgtcccgaccccgccgtc
ttcgtgctgtgggggaactacgcgaagaagaagctgcccctgatcgacaccgagcggcac
gtcgtggtgcagggtgcgcacccctccccgctgtccgccaagaagttctacggttcccgt
cccttcacccagatcaacgaggccgtcgccgcgcagggccacacgccgatcgactggcgc
atcccggacctggcggcgtccgcctcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system