KEGG T03855: TZ53

Sphingobium sp. YBL2: TZ53_19150

Entry

TZ53_19150        CDS       T03855

Name

(GenBank) RNA methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

syb Sphingobium sp. YBL2

Brite

KEGG Orthology (KO) [BR:syb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:syb03009]
    TZ53_19150
Enzymes [BR:syb01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     TZ53_19150
Ribosome biogenesis [BR:syb03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    TZ53_19150

SSDB

Motif

Pfam:

tRNA_U5-meth_tr PSD5 MTS

Other DBs

NCBI-ProteinID:

AJR25535

UniProt:

A0A0C5XLU3

Position

complement(4159868..4161073)

AA seq 401 aa
MTDPDTDIIVRIAAKGDGVTALGRHVPLTAPGDRIAADGGILQGPHHVDAPCVHFPTCGG
CELQHIDDASYAEFVTARVAGALAGQGVEPGMLLPPHISPPKVRRRASLRASRQGRKVVI
GFAESGSHMLVDLAMCEILDPRLFALVAPLRSLCAVILPEKRAAHVRMSLTDQGVDLLLE
GVRIEGLAADEALLTFAQDHGLARLTIDEGEGPQTRWEPEPVTVRFGGVPVAFPPFAFLQ
ATPDGEAALAREAQAAMPAEGAVADLFCGLGTFALALGDERPVYAAEAARDLVLSLQSAA
NRARRRMVADHRDLFRRPLTPAEIDRFAGIVIDPPRAGAREQAMQLAASRVPVIAYISCN
PASFARDAAHLIAGGYRLERVRPVGQFRWSTHVELVGIFRR

NT seq 1206 nt +upstreamnt +downstreamnt
gtgaccgaccctgataccgacatcatcgtccgcatcgccgcgaagggcgatggcgtgacc
gcccttggccgccatgttccgttgaccgcgcctggagacaggattgcggcggacggcggc
atattgcaggggccgcatcatgtcgacgcgccatgcgttcactttccgacctgcggcgga
tgcgagttgcagcatatcgacgatgcgagctacgcggagttcgtgacggcgcgcgttgca
ggagccctggcagggcagggcgtggaacccggcatgcttctgccgccgcatatctcgccg
ccgaaggtccgtcgccgtgcatcgctgcgcgcgagcaggcaggggcggaaggtcgtcatc
ggctttgccgaatcgggcagccatatgctggtcgacctcgcgatgtgcgagatcctcgat
ccccggctgttcgcgctggtggcgccgctgaggagcctgtgcgcggtcatcctgcccgag
aagcgcgctgcgcatgtccgcatgtcgctgaccgatcagggcgtcgaccttttgctggag
ggcgtgcggatcgaggggcttgccgccgacgaggcgcttctaacttttgcgcaggaccat
gggctggctcgcctgaccatcgatgaaggggagggtccgcagacgcggtgggaaccggag
ccggtcacggtccgcttcggcggcgtgccggttgcctttccgcccttcgcatttcttcag
gcgacccccgatggcgaagccgcgctggcgcgggaagcgcaggccgccatgccggcggag
ggcgccgttgcggatctcttttgcgggcttggcacattcgccctggctttgggggatgag
cggcccgtctatgcggcggaggcggcgcgtgatcttgtcctctccctccaatcggcggcg
aatagggcgcggcggcgcatggtggcggatcatcgcgatctgttcaggcgaccgctgacg
cctgcggagattgaccggttcgcggggattgtcatcgatccgccgcgcgcaggggcgcgc
gagcaggcgatgcagctcgccgcatcgcgggtgccggtgatcgcctatatttcgtgcaac
cctgccagtttcgcgcgggatgccgcgcatctgatcgccggcggctatcggctggagcgg
gttcggccggtggggcagttccgctggtccacccatgtggaactggtcggcatcttccgg
cgctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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