KEGG   Synechococcus elongatus PCC6301: syc1071_d
Entry
syc1071_d         CDS       T00163                                 
Symbol
nth
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
syc  Synechococcus elongatus PCC6301
Pathway
syc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:syc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    syc1071_d (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syc03400]
    syc1071_d (nth)
Enzymes [BR:syc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     syc1071_d (nth)
DNA repair and recombination proteins [BR:syc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     syc1071_d (nth)
 Prokaryotic type
     syc1071_d (nth)
SSDB
Motif
Pfam: HhH-GPD EndIII_4Fe-2S HHH RHH_8
Other DBs
NCBI-ProteinID: BAD79261
CyanoBase: syc1071_d
UniProt: A0A0H3K215
Position
1183343..1184029
AA seq 228 aa
MTTPRLSKKQRALAVLAELKQLYPEAPCSLDYETPLQLLVATILSAQCTDARVNLVTPAL
FARFPDAPAFAAADVGEIEELIRSTGFYRNKAKNIHAASRRIVEVYGGEVPQSMPELLTL
AGVARKTANVVLAHAFGINAGVTVDTHVKRLANRLGFTTHTDPIKIEQDLMKLLPQPDWE
NWSIRLVYHGRAVCDARKPACDRCSLADHCSTFRRTARKASGIMENAV
NT seq 687 nt   +upstreamnt  +downstreamnt
gtgacgacacctcgcttgtctaaaaagcagcgggcactggcagttttggctgagctcaag
cagctctatcccgaagcaccctgctcgctggactatgaaacgcccctacaactgctggtg
gcgacgattttgtcagcgcaatgcaccgatgccagggtcaacttggtgacgccggcgctg
tttgcgcgctttcctgatgctcctgcttttgcagcggcggatgtgggtgagattgaagag
ctgatccgctccacggggttttatcgcaacaaggcgaagaacattcatgccgctagtcgc
cgcattgtcgaggtctacgggggcgaagtcccgcaatcgatgccagagttgctgactctg
gcgggggttgcccgcaagaccgccaacgttgtcctagcccatgccttcgggattaatgct
ggtgtcacggtggatacccacgtcaaacggctggcgaatcgcctcggcttcaccactcac
acagatcccatcaagattgagcaggatctcatgaaactgctgccccagcccgactgggaa
aactggtcaattcggttggtctaccatggccgcgccgtttgcgatgcccgtaaacctgct
tgcgatcgctgcagtttggctgaccattgcagcacctttcgccggacagcccgaaaggcc
tctggtattatggagaatgctgtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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